Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm38388-201ENSMUST00000195569 1430 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm6062-201ENSMUST00000120462 631 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm11904-201ENSMUST00000120562 248 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm25827-201ENSMUST00000157089 107 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm24439-201ENSMUST00000157894 117 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm25459-201ENSMUST00000157953 114 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm24192-201ENSMUST00000157978 145 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm15900-201ENSMUST00000161584 342 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm26960-201ENSMUST00000182263 412 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm28579-201ENSMUST00000186143 369 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm28615-201ENSMUST00000187527 482 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm6510-201ENSMUST00000195916 574 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm9317-201ENSMUST00000197055 862 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm43116-201ENSMUST00000199789 195 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm44214-201ENSMUST00000204153 606 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm7540-201ENSMUST00000219764 926 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc116Q80X53 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm12568-201ENSMUST00000117362 624 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm15333-201ENSMUST00000118825 364 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm12787-201ENSMUST00000119234 396 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm23016-201ENSMUST00000158431 62 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm22530-201ENSMUST00000158820 118 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm25445-201ENSMUST00000158996 299 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm3053-201ENSMUST00000161709 616 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm3216-201ENSMUST00000166927 486 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm23450-201ENSMUST00000178285 91 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Mir6412-201ENSMUST00000184477 97 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm28299-201ENSMUST00000189908 339 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm38076-201ENSMUST00000193889 450 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm33354-201ENSMUST00000195448 906 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm44609-201ENSMUST00000207157 460 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm45375-201ENSMUST00000210338 280 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm18541-201ENSMUST00000215935 538 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm16335-201ENSMUST00000077495 309 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 n-R5s50-201ENSMUST00000083168 111 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Gm23096-201ENSMUST00000083447 107 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Mir181a-2-201ENSMUST00000083489 76 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc116Q80X53 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms