Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Gm25539-201ENSMUST00000116886 122 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Gm28118-201ENSMUST00000185957 294 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Gm28113-201ENSMUST00000188280 229 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Gm43214-201ENSMUST00000199242 352 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Gm43932-201ENSMUST00000204499 52 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Gm44600-201ENSMUST00000208540 111 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Gm35405-201ENSMUST00000218754 400 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Nup98Q6PFD9 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Nup98Q6PFD9 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup98Q6PFD9 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.96□□□□□ -1.77
Nup98Q6PFD9 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.96□□□□□ -1.77
Nup98Q6PFD9 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm13761-201ENSMUST00000117238 807 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm13155-201ENSMUST00000119277 646 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm8178-201ENSMUST00000121570 646 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm12858-201ENSMUST00000121913 208 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm29062-201ENSMUST00000186032 694 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm29259-201ENSMUST00000186396 694 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm28255-201ENSMUST00000187101 694 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm29545-201ENSMUST00000188878 694 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm7948-201ENSMUST00000212607 844 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm45066-201ENSMUST00000207528 2551 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
Nup98Q6PFD9 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm12268-201ENSMUST00000118398 442 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm14570-201ENSMUST00000119444 391 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm36991-201ENSMUST00000191800 648 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm42458-201ENSMUST00000201914 369 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 BC023105-201ENSMUST00000073997 1227 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Nup98Q6PFD9 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm8989-201ENSMUST00000184782 7275 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Mir1198-201ENSMUST00000116995 121 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm14647-201ENSMUST00000119392 680 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm25490-201ENSMUST00000158734 130 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm28920-201ENSMUST00000189957 699 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm42758-201ENSMUST00000202146 283 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm6850-201ENSMUST00000210031 530 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Gm18225-201ENSMUST00000216708 742 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Nup98Q6PFD9 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Gm26140-201ENSMUST00000103807 110 ntBASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Gm22936-201ENSMUST00000103955 126 ntBASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Gm12677-201ENSMUST00000118668 426 ntBASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Gm14788-201ENSMUST00000119457 375 ntBASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Gm23855-201ENSMUST00000158377 135 ntBASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Gm28094-201ENSMUST00000185262 390 ntBASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Gm45735-201ENSMUST00000212779 319 ntBASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Gm6195-201ENSMUST00000063059 357 ntBASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Nup98Q6PFD9 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Nup98Q6PFD9 Gm14065-201ENSMUST00000120848 585 ntBASIC3.93□□□□□ -1.78
Nup98Q6PFD9 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.93□□□□□ -1.78
Nup98Q6PFD9 Mir7014-201ENSMUST00000183853 63 ntBASIC3.93□□□□□ -1.78
Nup98Q6PFD9 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.93□□□□□ -1.78
Nup98Q6PFD9 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms