Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm27602-201ENSMUST00000183861 111 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm29592-201ENSMUST00000189434 370 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm37692-201ENSMUST00000192633 232 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm35857-201ENSMUST00000212739 178 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm18016-201ENSMUST00000216119 801 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm18620-201ENSMUST00000222295 324 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxc1Q61572 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Foxc1Q61572 Snora30-201ENSMUST00000083325 130 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Naip3-201ENSMUST00000118082 4208 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Foxc1Q61572 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxc1Q61572 Robo2-210ENSMUST00000226478 8059 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm20789-201ENSMUST00000221002 4195 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Foxc1Q61572 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Foxc1Q61572 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Foxc1Q61572 Gm43900-201ENSMUST00000204868 2669 ntBASIC4.75□□□□□ -1.65
Foxc1Q61572 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Foxc1Q61572 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxc1Q61572 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxc1Q61572 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxc1Q61572 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxc1Q61572 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Foxc1Q61572 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
Foxc1Q61572 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC4.74□□□□□ -1.65
Foxc1Q61572 AC153144.1-201ENSMUST00000221759 3139 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm22267-201ENSMUST00000104008 131 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm25875-201ENSMUST00000104323 107 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm24605-201ENSMUST00000104772 96 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm16032-201ENSMUST00000118534 168 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm15377-201ENSMUST00000119594 246 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm12495-201ENSMUST00000119750 447 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm23430-201ENSMUST00000122490 314 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm13901-201ENSMUST00000137252 468 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm25117-201ENSMUST00000157194 144 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm25486-201ENSMUST00000158726 63 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm26501-201ENSMUST00000178307 107 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm6214-201ENSMUST00000178845 541 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm21816-201ENSMUST00000179255 360 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Mir6346-201ENSMUST00000183982 81 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm27601-201ENSMUST00000184794 127 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Mir195b-201ENSMUST00000184814 97 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm37177-201ENSMUST00000193768 417 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm38076-201ENSMUST00000193889 450 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm9685-201ENSMUST00000211275 538 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm18586-201ENSMUST00000217265 518 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm29884-201ENSMUST00000218403 453 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC4.74□□□□□ -1.65
Foxc1Q61572 CT954323.1-201ENSMUST00000222774 229 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 AC139568.1-201ENSMUST00000222878 486 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm6575-201ENSMUST00000222946 697 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm7042-201ENSMUST00000223027 384 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 AC170086.2-201ENSMUST00000224733 803 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 AC137902.1-201ENSMUST00000228184 102 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm6104-201ENSMUST00000078030 603 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm21731-201ENSMUST00000079524 489 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm38248-201ENSMUST00000193744 5783 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Foxc1Q61572 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Foxc1Q61572 Gm20300-201ENSMUST00000214634 3440 ntBASIC4.74□□□□□ -1.65
Foxc1Q61572 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Foxc1Q61572 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Foxc1Q61572 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Foxc1Q61572 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Foxc1Q61572 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms