Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm44376-201ENSMUST00000197570 128 ntBASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm18997-201ENSMUST00000216353 822 ntBASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm6361-201ENSMUST00000091031 435 ntBASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc88aQ5SNZ0 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm8244-201ENSMUST00000121254 264 ntBASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm21990-201ENSMUST00000124692 383 ntBASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm6510-201ENSMUST00000195916 574 ntBASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Mir7682-201ENSMUST00000198467 58 ntBASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm34005-201ENSMUST00000215834 282 ntBASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr512-201ENSMUST00000074730 1056 ntBASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.1□□□□□ -1.75
Ccdc88aQ5SNZ0 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm9119-201ENSMUST00000118866 495 ntBASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm12998-201ENSMUST00000122445 789 ntBASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm22310-201ENSMUST00000157509 116 ntBASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm23257-201ENSMUST00000158322 132 ntBASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm45327-201ENSMUST00000211612 565 ntBASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm43466-201ENSMUST00000197836 5214 ntBASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc88aQ5SNZ0 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm12985-201ENSMUST00000118376 183 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm12118-201ENSMUST00000119766 532 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm11704-201ENSMUST00000120031 214 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm11830-201ENSMUST00000120175 561 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm6762-201ENSMUST00000121769 289 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm24914-201ENSMUST00000157285 313 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm18597-201ENSMUST00000209519 694 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 BC023105-201ENSMUST00000073997 1227 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.09□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm12261-201ENSMUST00000117499 645 ntBASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm9208-201ENSMUST00000120468 948 ntBASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm23902-201ENSMUST00000157571 134 ntBASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm23402-201ENSMUST00000178130 107 ntBASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm28030-201ENSMUST00000184987 138 ntBASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm29064-201ENSMUST00000187014 813 ntBASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm43825-201ENSMUST00000199650 734 ntBASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm43892-201ENSMUST00000204373 265 ntBASIC4.08□□□□□ -1.76
Ccdc88aQ5SNZ0 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms