Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm14890-201ENSMUST00000117660 676 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm1866-201ENSMUST00000120701 477 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Mup-ps15-201ENSMUST00000121741 539 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm16471-201ENSMUST00000121940 618 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm11233-201ENSMUST00000122357 634 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm15534-201ENSMUST00000137642 562 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm26276-201ENSMUST00000157099 109 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm23084-201ENSMUST00000157850 114 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm23666-201ENSMUST00000158053 116 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm23824-201ENSMUST00000158741 276 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm27834-201ENSMUST00000183427 125 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm36964-201ENSMUST00000191876 198 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm37603-201ENSMUST00000192368 219 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm8939-201ENSMUST00000192577 964 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Trbv8-201ENSMUST00000194020 285 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm42526-201ENSMUST00000198956 393 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm18242-201ENSMUST00000218455 542 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm12582-201ENSMUST00000030555 697 ntBASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim58Q5NCC9 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm12358-201ENSMUST00000121842 520 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm4725-201ENSMUST00000151048 587 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm23959-201ENSMUST00000157208 324 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Mir6933-201ENSMUST00000184982 81 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm27392-201ENSMUST00000185041 101 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm6680-201ENSMUST00000192789 950 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 AC139376.1-201ENSMUST00000220056 1250 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm8785-201ENSMUST00000220259 487 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm25480-201ENSMUST00000083217 133 ntBASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Trim58Q5NCC9 Gm6982-201ENSMUST00000118752 1560 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm25537-201ENSMUST00000103851 109 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm25169-201ENSMUST00000104190 129 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm26145-201ENSMUST00000104476 127 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm25967-201ENSMUST00000157168 147 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm22034-201ENSMUST00000157283 134 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm27033-201ENSMUST00000183226 544 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm29320-201ENSMUST00000185235 615 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm29179-202ENSMUST00000186138 615 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm28598-201ENSMUST00000186490 615 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm29448-201ENSMUST00000186675 615 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm29314-201ENSMUST00000186800 615 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm28253-202ENSMUST00000187971 615 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm29268-201ENSMUST00000188669 615 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm29169-201ENSMUST00000189835 615 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm29218-205ENSMUST00000190846 615 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm28978-201ENSMUST00000191120 615 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm37172-201ENSMUST00000191926 615 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm18429-201ENSMUST00000198707 421 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Trim58Q5NCC9 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Gm4036-201ENSMUST00000220842 626 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.48□□□□□ -1.69
Trim58Q5NCC9 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms