Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm37300-201ENSMUST00000193327 280 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm3010-201ENSMUST00000198805 448 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm43710-201ENSMUST00000199583 452 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm17887-201ENSMUST00000200194 547 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm44184-201ENSMUST00000204290 132 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm45696-201ENSMUST00000212088 985 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm6988-201ENSMUST00000222676 375 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 CT025552.2-201ENSMUST00000225497 317 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm23104-201ENSMUST00000083722 104 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 n-R5s16-201ENSMUST00000104555 119 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm26376-201ENSMUST00000104784 110 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm14879-201ENSMUST00000117308 507 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm13314-201ENSMUST00000118742 335 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm5943-201ENSMUST00000119458 459 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm15193-201ENSMUST00000120224 865 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm14939-201ENSMUST00000120347 680 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm14037-201ENSMUST00000120576 313 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm13502-201ENSMUST00000121574 684 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm13745-201ENSMUST00000121994 527 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm25981-201ENSMUST00000157921 295 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm22536-201ENSMUST00000158171 134 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm26460-201ENSMUST00000175061 126 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm7094-201ENSMUST00000178379 366 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Mir6715-201ENSMUST00000184990 57 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm28917-201ENSMUST00000187294 237 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm28766-201ENSMUST00000191086 234 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm35570-201ENSMUST00000198730 681 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm43651-201ENSMUST00000199796 439 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm46998-201ENSMUST00000221444 330 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm19540-201ENSMUST00000221843 810 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Gm25800-201ENSMUST00000082636 134 ntBASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim40Q3UWA4 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm22778-201ENSMUST00000104090 128 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm15994-201ENSMUST00000118029 402 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm15168-201ENSMUST00000121057 316 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm11260-201ENSMUST00000121163 942 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm23957-201ENSMUST00000157209 90 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm15974-201ENSMUST00000159103 531 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms