Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm11874-201ENSMUST00000117437 130 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm6893-201ENSMUST00000118385 522 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm14554-201ENSMUST00000119548 661 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm11746-201ENSMUST00000119843 821 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm23123-201ENSMUST00000157648 144 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm24727-201ENSMUST00000158231 144 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm25898-201ENSMUST00000158303 106 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm3030-201ENSMUST00000163410 516 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm3339-201ENSMUST00000163462 475 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm4207-201ENSMUST00000173144 960 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Mir6345-201ENSMUST00000184286 128 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm37002-201ENSMUST00000194560 373 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm36985-201ENSMUST00000195595 379 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm25200-201ENSMUST00000083094 130 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Defa-ps18-201ENSMUST00000098889 371 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Trafd1Q3UDK1 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm13359-201ENSMUST00000119000 695 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm15313-201ENSMUST00000119179 282 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm11446-201ENSMUST00000121319 866 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm16471-201ENSMUST00000121940 618 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm26476-201ENSMUST00000122618 313 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm6058-201ENSMUST00000154261 399 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm24850-201ENSMUST00000158029 119 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm24773-201ENSMUST00000158513 99 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm17164-201ENSMUST00000169013 506 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Mir1251-201ENSMUST00000175486 84 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm27715-201ENSMUST00000184714 260 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm37193-201ENSMUST00000193087 513 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm38080-201ENSMUST00000194035 268 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm44615-201ENSMUST00000206548 358 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 AC115357.1-201ENSMUST00000227575 466 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trafd1Q3UDK1 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms