Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm22473-201ENSMUST00000104114 132 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm23014-201ENSMUST00000104144 130 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm23608-201ENSMUST00000104545 128 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm16128-201ENSMUST00000117855 626 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm24768-201ENSMUST00000158512 94 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm25413-201ENSMUST00000158544 312 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm13147-202ENSMUST00000177526 1173 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Mir8118-201ENSMUST00000183962 129 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm23925-202ENSMUST00000188429 132 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm29097-201ENSMUST00000190273 422 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm37288-201ENSMUST00000193963 334 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm45651-201ENSMUST00000210857 335 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm9628-201ENSMUST00000222169 725 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Brf2Q3UAW9 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm7974-201ENSMUST00000117154 408 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm15766-201ENSMUST00000118025 813 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm15553-201ENSMUST00000118757 430 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm12311-201ENSMUST00000118803 374 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm14541-201ENSMUST00000118985 157 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm12734-201ENSMUST00000120228 948 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm23638-201ENSMUST00000175073 126 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm23158-201ENSMUST00000175076 126 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm22907-201ENSMUST00000175198 126 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm22625-201ENSMUST00000175382 126 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm22875-201ENSMUST00000175449 126 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm25197-201ENSMUST00000175516 126 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm27857-201ENSMUST00000176930 126 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm26268-201ENSMUST00000177685 126 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm23681-201ENSMUST00000178821 126 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Mir6903-201ENSMUST00000183597 88 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Mir7006-201ENSMUST00000183624 69 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm27940-201ENSMUST00000184449 98 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm18181-201ENSMUST00000190670 736 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm29389-201ENSMUST00000191562 352 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm37543-201ENSMUST00000192443 1031 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm7182-201ENSMUST00000193351 732 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm36943-201ENSMUST00000194422 282 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm43004-201ENSMUST00000201872 703 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm44583-201ENSMUST00000207478 281 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 Gm18729-201ENSMUST00000217230 621 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 AC120540.1-201ENSMUST00000221879 324 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.12□□□□□ -1.75
Brf2Q3UAW9 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms