Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm22852-201ENSMUST00000177899 101 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm18505-201ENSMUST00000187360 790 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm23925-202ENSMUST00000188429 132 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm29489-201ENSMUST00000188934 324 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm8823-201ENSMUST00000193158 433 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm28724-202ENSMUST00000194218 295 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm43355-201ENSMUST00000196541 346 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm43408-201ENSMUST00000198263 440 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm44134-202ENSMUST00000204777 545 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm45628-201ENSMUST00000210849 274 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm45588-201ENSMUST00000211213 630 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm2059-201ENSMUST00000212025 287 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm7760-201ENSMUST00000212265 578 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm7807-201ENSMUST00000212475 578 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm29785-201ENSMUST00000217033 383 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.6□□□□□ -1.67
Col8a1Q00780 AC141425.1-201ENSMUST00000224989 265 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm22423-201ENSMUST00000082861 184 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm22741-201ENSMUST00000083438 165 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm38362-201ENSMUST00000192999 2064 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 AC121844.2-201ENSMUST00000219067 2066 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm44675-201ENSMUST00000208188 2927 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 AC152944.1-201ENSMUST00000220160 3101 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm23431-201ENSMUST00000104006 107 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm25096-201ENSMUST00000104043 129 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm22021-201ENSMUST00000104353 107 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm23839-201ENSMUST00000116957 109 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm11912-201ENSMUST00000117235 264 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm14292-201ENSMUST00000118761 456 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm11881-201ENSMUST00000119408 572 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm15364-201ENSMUST00000119618 585 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm25325-201ENSMUST00000122559 86 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm24419-201ENSMUST00000157875 332 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm3084-201ENSMUST00000169967 598 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm22584-201ENSMUST00000177935 92 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm26988-201ENSMUST00000183296 945 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm37603-201ENSMUST00000192368 219 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm29736-201ENSMUST00000198189 385 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 Mir3970-201ENSMUST00000199287 90 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm43440-201ENSMUST00000201957 729 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm5735-201ENSMUST00000207053 167 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC4.59□□□□□ -1.67
Col8a1Q00780 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm45742-201ENSMUST00000212400 433 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms