Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm13865-201ENSMUST00000120957 865 ntBASIC5.25□□□□□ -1.57
Cux1P53564 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cux1P53564 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cux1P53564 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.25□□□□□ -1.57
Cux1P53564 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Cux1P53564 AC130477.2-201ENSMUST00000228158 274 ntBASIC5.25□□□□□ -1.57
Cux1P53564 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
Cux1P53564 Gm43300-201ENSMUST00000198540 2043 ntBASIC5.25□□□□□ -1.57
Cux1P53564 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cux1P53564 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cux1P53564 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cux1P53564 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cux1P53564 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Cux1P53564 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cux1P53564 Gm42547-201ENSMUST00000201159 3798 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cux1P53564 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Gm37236-201ENSMUST00000193670 3249 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Gm26140-201ENSMUST00000103807 110 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Gm26988-201ENSMUST00000183296 945 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Gm29062-201ENSMUST00000186032 694 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Gm29259-201ENSMUST00000186396 694 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Gm28255-201ENSMUST00000187101 694 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Gm29545-201ENSMUST00000188878 694 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Gm25203-202ENSMUST00000200458 216 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Gm44869-201ENSMUST00000208836 357 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Gm44887-201ENSMUST00000208980 178 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Gm25203-201ENSMUST00000082842 215 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cux1P53564 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cux1P53564 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Cux1P53564 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cux1P53564 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.24□□□□□ -1.57
Cux1P53564 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cux1P53564 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Cux1P53564 Gm22538-201ENSMUST00000158169 299 ntBASIC5.23□□□□□ -1.57
Cux1P53564 Gm36991-201ENSMUST00000191800 648 ntBASIC5.23□□□□□ -1.57
Cux1P53564 Gm19726-201ENSMUST00000205008 240 ntBASIC5.23□□□□□ -1.57
Cux1P53564 Gm45400-201ENSMUST00000211603 653 ntBASIC5.23□□□□□ -1.57
Cux1P53564 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC5.23□□□□□ -1.57
Cux1P53564 Gm23615-201ENSMUST00000082602 65 ntBASIC5.23□□□□□ -1.57
Cux1P53564 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.23□□□□□ -1.57
Cux1P53564 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.23□□□□□ -1.57
Cux1P53564 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Cux1P53564 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cux1P53564 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cux1P53564 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cux1P53564 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Cux1P53564 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
Cux1P53564 Gm16101-201ENSMUST00000160695 430 ntBASIC5.23□□□□□ -1.57
Cux1P53564 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cux1P53564 Gm43227-201ENSMUST00000202239 677 ntBASIC5.23□□□□□ -1.57
Cux1P53564 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC5.23□□□□□ -1.57
Cux1P53564 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.23□□□□□ -1.57
Cux1P53564 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Cux1P53564 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Cux1P53564 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.22□□□□□ -1.57
Cux1P53564 Gm12071-201ENSMUST00000121968 469 ntBASIC5.22□□□□□ -1.57
Cux1P53564 Gm18520-201ENSMUST00000174783 658 ntBASIC5.22□□□□□ -1.57
Cux1P53564 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC5.22□□□□□ -1.57
Cux1P53564 Gm43899-201ENSMUST00000203675 246 ntBASIC5.22□□□□□ -1.57
Cux1P53564 AC166358.4-201ENSMUST00000223030 105 ntBASIC5.22□□□□□ -1.57
Cux1P53564 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.22□□□□□ -1.57
Cux1P53564 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC5.22□□□□□ -1.57
Cux1P53564 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Cux1P53564 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
Cux1P53564 Gm22043-201ENSMUST00000082993 158 ntBASIC5.22□□□□□ -1.57
Cux1P53564 AF357428-201ENSMUST00000083815 69 ntBASIC5.22□□□□□ -1.57
Cux1P53564 Gm45093-201ENSMUST00000206859 2463 ntBASIC5.22□□□□□ -1.57
Cux1P53564 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.22□□□□□ -1.57
Cux1P53564 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.22□□□□□ -1.57
Cux1P53564 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
Cux1P53564 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC5.21□□□□□ -1.57
Cux1P53564 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cux1P53564 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cux1P53564 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cux1P53564 Mir711-201ENSMUST00000102188 82 ntBASIC5.21□□□□□ -1.58
Cux1P53564 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cux1P53564 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cux1P53564 Gm16021-201ENSMUST00000121176 219 ntBASIC5.21□□□□□ -1.58
Cux1P53564 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC5.21□□□□□ -1.58
Cux1P53564 Gm28113-201ENSMUST00000188280 229 ntBASIC5.21□□□□□ -1.58
Cux1P53564 Gm43214-201ENSMUST00000199242 352 ntBASIC5.21□□□□□ -1.58
Cux1P53564 Gm44712-201ENSMUST00000206250 1076 ntBASIC5.21□□□□□ -1.58
Cux1P53564 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cux1P53564 AC123618.1-201ENSMUST00000220174 360 ntBASIC5.21□□□□□ -1.58
Cux1P53564 Gm18363-201ENSMUST00000221671 730 ntBASIC5.21□□□□□ -1.58
Cux1P53564 AC118006.2-201ENSMUST00000224167 962 ntBASIC5.21□□□□□ -1.58
Cux1P53564 AC147628.1-201ENSMUST00000228193 688 ntBASIC5.21□□□□□ -1.58
Cux1P53564 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cux1P53564 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Cux1P53564 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Cux1P53564 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
Cux1P53564 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cux1P53564 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cux1P53564 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cux1P53564 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cux1P53564 Gm42675-201ENSMUST00000197552 4035 ntBASIC5.2□□□□□ -1.58
Cux1P53564 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms