Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Gm29335-201ENSMUST00000188361 459 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm38046-201ENSMUST00000192733 550 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Gm37889-201ENSMUST00000194174 251 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC5.04□□□□□ -1.6
Shmt1P50431 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm6051-201ENSMUST00000201529 352 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC5.04□□□□□ -1.6
Shmt1P50431 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Shmt1P50431 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Shmt1P50431 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Shmt1P50431 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.04□□□□□ -1.6
Shmt1P50431 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
Shmt1P50431 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Shmt1P50431 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Shmt1P50431 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Shmt1P50431 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Shmt1P50431 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Shmt1P50431 Snord70-201ENSMUST00000104157 87 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm14909-201ENSMUST00000117853 351 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm12016-201ENSMUST00000119079 681 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm15120-201ENSMUST00000120602 301 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm11254-201ENSMUST00000122368 653 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Shmt1P50431 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.03□□□□□ -1.6
Shmt1P50431 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm26098-201ENSMUST00000157247 288 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm25048-201ENSMUST00000158598 91 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Trbv10-201ENSMUST00000168322 289 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Shmt1P50431 Gm17152-201ENSMUST00000172430 535 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC5.03□□□□□ -1.6
Shmt1P50431 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.03□□□□□ -1.6
Shmt1P50431 Gm27875-201ENSMUST00000184425 123 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Shmt1P50431 Gm28116-201ENSMUST00000189064 387 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm37961-201ENSMUST00000192729 299 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm37659-201ENSMUST00000194574 111 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm43370-201ENSMUST00000196437 284 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC5.03□□□□□ -1.6
Shmt1P50431 Gm42643-201ENSMUST00000200504 279 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm45236-201ENSMUST00000208632 229 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm45409-201ENSMUST00000211486 252 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 AC073947.3-201ENSMUST00000215576 766 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.03□□□□□ -1.6
Shmt1P50431 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Shmt1P50431 CT009713.9-201ENSMUST00000223604 389 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 AC138667.2-201ENSMUST00000224880 598 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 AC160999.1-201ENSMUST00000225675 810 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Shmt1P50431 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.03□□□□□ -1.6
Shmt1P50431 Gm23614-201ENSMUST00000082598 107 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Shmt1P50431 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Shmt1P50431 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.03□□□□□ -1.6
Shmt1P50431 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Shmt1P50431 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Shmt1P50431 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Shmt1P50431 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Shmt1P50431 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Shmt1P50431 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Shmt1P50431 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Shmt1P50431 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.02□□□□□ -1.61
Shmt1P50431 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Shmt1P50431 Gm23608-201ENSMUST00000104545 128 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Shmt1P50431 Gm12683-201ENSMUST00000117528 415 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Gm8475-201ENSMUST00000118211 526 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 Gm22452-201ENSMUST00000122804 104 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.02□□□□□ -1.61
Shmt1P50431 Gm14651-201ENSMUST00000147192 442 ntBASIC5.02□□□□□ -1.61
Shmt1P50431 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Shmt1P50431 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms