Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Trbv11-201ENSMUST00000194354 260 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm43580-201ENSMUST00000202892 284 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm18462-201ENSMUST00000208112 417 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ercc3P49135 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC5.12□□□□□ -1.59
Ercc3P49135 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ercc3P49135 Gm31931-201ENSMUST00000219666 222 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ercc3P49135 Gm22423-201ENSMUST00000082861 184 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm5518-201ENSMUST00000084171 648 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ercc3P49135 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ercc3P49135 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ercc3P49135 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ercc3P49135 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Neat1-201ENSMUST00000173672 20771 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ercc3P49135 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Ercc3P49135 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ercc3P49135 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ercc3P49135 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Ercc3P49135 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ercc3P49135 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ercc3P49135 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ercc3P49135 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ercc3P49135 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ercc3P49135 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Mir761-201ENSMUST00000103245 76 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Ercc3P49135 Gm22709-201ENSMUST00000116893 111 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Gm15076-201ENSMUST00000117076 474 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Gm13386-201ENSMUST00000117677 124 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Gm15426-201ENSMUST00000117823 556 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.11□□□□□ -1.59
Ercc3P49135 Gm22817-201ENSMUST00000157448 356 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Gm23781-201ENSMUST00000157940 308 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.11□□□□□ -1.59
Ercc3P49135 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ercc3P49135 Gm28830-201ENSMUST00000188192 213 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ercc3P49135 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ercc3P49135 Gm44521-201ENSMUST00000206469 217 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 AC127302.1-201ENSMUST00000215973 1111 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 AC069561.3-201ENSMUST00000217321 114 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.11□□□□□ -1.59
Ercc3P49135 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.11□□□□□ -1.59
Ercc3P49135 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Gm3333-202ENSMUST00000221763 1044 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ercc3P49135 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ercc3P49135 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Ercc3P49135 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ercc3P49135 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ercc3P49135 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ercc3P49135 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ercc3P49135 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ercc3P49135 Gm43658-201ENSMUST00000202348 4176 ntBASIC5.11□□□□□ -1.59
Ercc3P49135 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ercc3P49135 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ercc3P49135 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Ercc3P49135 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Ercc3P49135 Gm13785-201ENSMUST00000119099 690 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm12564-201ENSMUST00000119860 321 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm14926-201ENSMUST00000120650 508 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm7869-201ENSMUST00000121457 1322 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm22818-201ENSMUST00000157446 104 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm25606-201ENSMUST00000158363 95 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm21816-201ENSMUST00000179255 360 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.1□□□□□ -1.59
Ercc3P49135 Mir6411-201ENSMUST00000183556 108 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Mir6537-201ENSMUST00000184150 110 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm6501-201ENSMUST00000187178 916 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm29640-201ENSMUST00000187972 278 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ercc3P49135 Gm28500-201ENSMUST00000190286 151 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.1□□□□□ -1.59
Ercc3P49135 Gm43491-201ENSMUST00000197133 784 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm18327-201ENSMUST00000202426 830 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 AC153646.1-201ENSMUST00000223229 1279 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 AC150560.3-201ENSMUST00000227442 455 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 AC121114.1-201ENSMUST00000228522 570 ntBASIC5.1□□□□□ -1.59
Ercc3P49135 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ercc3P49135 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ercc3P49135 Gm25131-201ENSMUST00000082653 151 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms