Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC6.21□□□□□ -1.42
Rfx1P48377 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Clec2j-201ENSMUST00000032517 515 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm22456-201ENSMUST00000082578 125 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm26056-201ENSMUST00000083043 104 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm25512-201ENSMUST00000083863 107 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Rfx1P48377 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Rfx1P48377 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Rfx1P48377 CT009733.2-202ENSMUST00000224171 4748 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Rfx1P48377 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Rfx1P48377 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Rfx1P48377 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Rfx1P48377 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Rfx1P48377 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Rfx1P48377 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Rfx1P48377 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Rfx1P48377 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Rfx1P48377 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rfx1P48377 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Rfx1P48377 Gm22195-201ENSMUST00000116861 108 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Gm12495-201ENSMUST00000119750 447 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Gm12578-201ENSMUST00000121244 417 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC6.2□□□□□ -1.42
Rfx1P48377 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6.2□□□□□ -1.42
Rfx1P48377 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC6.2□□□□□ -1.42
Rfx1P48377 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC6.2□□□□□ -1.42
Rfx1P48377 Gm4557-201ENSMUST00000185826 907 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Gm4526-201ENSMUST00000186039 920 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Gm8708-201ENSMUST00000188500 906 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Gm8939-201ENSMUST00000192577 964 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Gm37757-201ENSMUST00000193072 210 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rfx1P48377 AC153141.1-201ENSMUST00000218636 501 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Gm5750-201ENSMUST00000218711 801 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 AC153794.2-201ENSMUST00000222650 550 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 AC239878.1-201ENSMUST00000224212 506 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 AC121599.1-201ENSMUST00000224276 449 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 AC163646.2-201ENSMUST00000227962 141 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Rfx1P48377 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Rfx1P48377 n-R5s160-201ENSMUST00000083096 120 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Gm23677-201ENSMUST00000083156 104 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Rfx1P48377 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Rfx1P48377 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Rfx1P48377 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Rfx1P48377 Gm37456-201ENSMUST00000193176 5837 ntBASIC6.2□□□□□ -1.42
Rfx1P48377 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Rfx1P48377 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Rfx1P48377 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Rfx1P48377 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rfx1P48377 Gm20667-201ENSMUST00000175674 1930 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Gm37677-201ENSMUST00000194520 7634 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Rfx1P48377 Gm22834-201ENSMUST00000102021 79 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Rfx1P48377 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Rfx1P48377 Gm14711-201ENSMUST00000117056 217 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Gm14995-201ENSMUST00000117135 391 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.19□□□□□ -1.42
Rfx1P48377 Gm28389-201ENSMUST00000190090 697 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Gm29332-201ENSMUST00000190829 227 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Gm28098-201ENSMUST00000191361 699 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Gm20770-201ENSMUST00000193474 694 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rfx1P48377 Igkv2-105-201ENSMUST00000196931 377 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rfx1P48377 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.19□□□□□ -1.42
Rfx1P48377 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.19□□□□□ -1.42
Rfx1P48377 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Rfx1P48377 Gm46223-201ENSMUST00000215196 675 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 AC138718.1-201ENSMUST00000225947 1009 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Rfx1P48377 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Rfx1P48377 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rfx1P48377 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Rfx1P48377 Gm7099-201ENSMUST00000080066 554 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 AC113059.3-201ENSMUST00000217423 2777 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Gm35629-201ENSMUST00000209684 2241 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rfx1P48377 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rfx1P48377 Gm19666-201ENSMUST00000198176 1893 ntBASIC6.19□□□□□ -1.42
Rfx1P48377 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rfx1P48377 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rfx1P48377 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Rfx1P48377 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rfx1P48377 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rfx1P48377 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rfx1P48377 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Rfx1P48377 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rfx1P48377 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Rfx1P48377 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.18□□□□□ -1.42
Rfx1P48377 Gm14560-201ENSMUST00000118672 375 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms