Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Traf1P39428 Gm23271-201ENSMUST00000104052 124 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm8666-201ENSMUST00000117517 292 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm13567-201ENSMUST00000118026 247 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm12587-201ENSMUST00000120180 427 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm14926-201ENSMUST00000120650 508 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm12486-201ENSMUST00000120887 541 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm15061-201ENSMUST00000121076 1046 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.75□□□□□ -1.65
Traf1P39428 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Traf1P39428 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Traf1P39428 Gm15974-201ENSMUST00000159103 531 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm5929-201ENSMUST00000166883 487 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm5473-201ENSMUST00000179326 642 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm28596-201ENSMUST00000185870 696 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm28997-201ENSMUST00000188759 429 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm32295-201ENSMUST00000192558 696 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm31260-201ENSMUST00000193478 696 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm42451-201ENSMUST00000197410 244 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm4644-201ENSMUST00000197587 400 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm19908-201ENSMUST00000204684 391 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm5358-201ENSMUST00000212814 353 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm29774-201ENSMUST00000219270 436 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Traf1P39428 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.75□□□□□ -1.65
Traf1P39428 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Traf1P39428 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.75□□□□□ -1.65
Traf1P39428 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Traf1P39428 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.74□□□□□ -1.65
Traf1P39428 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Traf1P39428 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Traf1P39428 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Traf1P39428 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Traf1P39428 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Traf1P39428 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Traf1P39428 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Traf1P39428 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Traf1P39428 Gm5757-201ENSMUST00000117494 528 ntBASIC4.74□□□□□ -1.65
Traf1P39428 Clec2f-201ENSMUST00000121051 374 ntBASIC4.74□□□□□ -1.65
Traf1P39428 Gm13973-201ENSMUST00000121371 894 ntBASIC4.74□□□□□ -1.65
Traf1P39428 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.74□□□□□ -1.65
Traf1P39428 Gm15279-201ENSMUST00000155593 288 ntBASIC4.74□□□□□ -1.65
Traf1P39428 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
Traf1P39428 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.74□□□□□ -1.65
Traf1P39428 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Traf1P39428 Gm17935-201ENSMUST00000196649 772 ntBASIC4.74□□□□□ -1.65
Traf1P39428 Gm43476-201ENSMUST00000197873 405 ntBASIC4.74□□□□□ -1.65
Traf1P39428 Gm18660-201ENSMUST00000199542 629 ntBASIC4.74□□□□□ -1.65
Traf1P39428 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Traf1P39428 Gm19726-201ENSMUST00000205008 240 ntBASIC4.74□□□□□ -1.65
Traf1P39428 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC4.74□□□□□ -1.65
Traf1P39428 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.74□□□□□ -1.65
Traf1P39428 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Traf1P39428 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.74□□□□□ -1.65
Traf1P39428 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.74□□□□□ -1.65
Traf1P39428 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.74□□□□□ -1.65
Traf1P39428 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.74□□□□□ -1.65
Traf1P39428 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.74□□□□□ -1.65
Traf1P39428 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Traf1P39428 Mir325-201ENSMUST00000083491 98 ntBASIC4.74□□□□□ -1.65
Traf1P39428 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.74□□□□□ -1.65
Traf1P39428 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Traf1P39428 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Traf1P39428 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Traf1P39428 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.74□□□□□ -1.65
Traf1P39428 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Traf1P39428 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Traf1P39428 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Traf1P39428 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Traf1P39428 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Traf1P39428 Gm25169-201ENSMUST00000104190 129 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.73□□□□□ -1.65
Traf1P39428 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Traf1P39428 Gm16100-201ENSMUST00000120489 231 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Traf1P39428 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Traf1P39428 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.73□□□□□ -1.65
Traf1P39428 Gm26171-201ENSMUST00000158422 131 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Gm7241-201ENSMUST00000159853 357 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.73□□□□□ -1.65
Traf1P39428 Gm18604-201ENSMUST00000172535 558 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 153.2 ms