Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm19126-201ENSMUST00000207896 509 ntBASIC5.85□□□□□ -1.47
Msx1P13297 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Gm22828-201ENSMUST00000083768 107 ntBASIC5.85□□□□□ -1.47
Msx1P13297 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Msx1P13297 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.85□□□□□ -1.47
Msx1P13297 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.85□□□□□ -1.47
Msx1P13297 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Msx1P13297 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx1P13297 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msx1P13297 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msx1P13297 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msx1P13297 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Msx1P13297 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msx1P13297 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Msx1P13297 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msx1P13297 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msx1P13297 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Msx1P13297 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Msx1P13297 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Msx1P13297 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Msx1P13297 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Msx1P13297 Gm24867-201ENSMUST00000104161 107 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm25919-201ENSMUST00000104271 132 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm13641-201ENSMUST00000117993 473 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm13469-201ENSMUST00000118231 350 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm14940-201ENSMUST00000119309 495 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm12564-201ENSMUST00000119860 321 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm13677-201ENSMUST00000120739 595 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm11852-201ENSMUST00000120806 222 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msx1P13297 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msx1P13297 Gm25459-201ENSMUST00000157953 114 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm23892-201ENSMUST00000158105 130 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm24359-201ENSMUST00000158418 221 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm16164-201ENSMUST00000160078 468 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Mir3572-201ENSMUST00000175549 86 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.84□□□□□ -1.47
Msx1P13297 Gm27851-201ENSMUST00000183529 63 ntBASIC5.84□□□□□ -1.47
Msx1P13297 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.84□□□□□ -1.47
Msx1P13297 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
Msx1P13297 Gm43105-201ENSMUST00000202987 459 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.84□□□□□ -1.47
Msx1P13297 AC130829.3-201ENSMUST00000222735 154 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm7040-201ENSMUST00000223271 443 ntBASIC5.84□□□□□ -1.47
Msx1P13297 AL627387.1-201ENSMUST00000226063 250 ntBASIC5.84□□□□□ -1.47
Msx1P13297 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Gm10540-201ENSMUST00000097581 276 ntBASIC5.84□□□□□ -1.47
Msx1P13297 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msx1P13297 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Msx1P13297 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Msx1P13297 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.84□□□□□ -1.47
Msx1P13297 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Msx1P13297 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msx1P13297 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.84□□□□□ -1.48
Msx1P13297 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.84□□□□□ -1.48
Msx1P13297 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Msx1P13297 Gm42940-201ENSMUST00000200361 2362 ntBASIC5.84□□□□□ -1.48
Msx1P13297 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Msx1P13297 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.83□□□□□ -1.48
Msx1P13297 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.83□□□□□ -1.48
Msx1P13297 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm14296-202ENSMUST00000108931 750 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Gm22952-201ENSMUST00000116720 120 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm15332-201ENSMUST00000118386 357 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm13876-201ENSMUST00000118451 261 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm12115-201ENSMUST00000119969 447 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm14926-201ENSMUST00000120650 508 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm23463-201ENSMUST00000122468 99 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm5699-201ENSMUST00000152491 723 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm22814-201ENSMUST00000157452 104 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm16232-201ENSMUST00000162856 167 ntBASIC5.83□□□□□ -1.48
Msx1P13297 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Msx1P13297 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Msx1P13297 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Msx1P13297 Gm8939-201ENSMUST00000192577 964 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm17934-201ENSMUST00000192818 422 ntBASIC5.83□□□□□ -1.48
Msx1P13297 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.83□□□□□ -1.48
Msx1P13297 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.83□□□□□ -1.48
Msx1P13297 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.83□□□□□ -1.48
Msx1P13297 AC152979.1-201ENSMUST00000218214 289 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms