Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Trbv28-201ENSMUST00000192804 264 ntBASIC4.06□□□□□ -1.76
Chmp6P0C0A3 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Gm43440-201ENSMUST00000201957 729 ntBASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Gm44059-201ENSMUST00000204048 351 ntBASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Gm45553-201ENSMUST00000209929 507 ntBASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Gm3829-201ENSMUST00000222362 619 ntBASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Chmp6P0C0A3 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Chmp6P0C0A3 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm25169-201ENSMUST00000104190 129 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm11408-201ENSMUST00000117889 519 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm7421-201ENSMUST00000119298 639 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm7365-201ENSMUST00000120877 639 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm5123-201ENSMUST00000121905 837 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm5755-201ENSMUST00000152394 837 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm22531-201ENSMUST00000158819 140 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Mir5710-201ENSMUST00000176884 69 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm26556-201ENSMUST00000180645 320 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Mir6975-201ENSMUST00000184879 61 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm27427-201ENSMUST00000185134 193 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm28596-201ENSMUST00000185870 696 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm32295-201ENSMUST00000192558 696 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm31260-201ENSMUST00000193478 696 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm37239-201ENSMUST00000193510 141 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm21006-201ENSMUST00000196930 667 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm42919-201ENSMUST00000197753 1284 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Olfr713-201ENSMUST00000098139 975 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.05□□□□□ -1.76
Chmp6P0C0A3 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm36962-201ENSMUST00000192114 1761 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Mir690-201ENSMUST00000102110 109 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm23697-201ENSMUST00000103897 110 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm25420-201ENSMUST00000104216 127 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm15613-201ENSMUST00000118396 326 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm6797-201ENSMUST00000119440 512 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm13557-201ENSMUST00000120771 382 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm13743-201ENSMUST00000121486 724 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm14559-201ENSMUST00000121745 496 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm24745-201ENSMUST00000157840 85 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm26171-201ENSMUST00000158422 131 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm19885-201ENSMUST00000212853 343 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 AC132104.1-201ENSMUST00000213615 260 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Gm19599-201ENSMUST00000218898 358 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.04□□□□□ -1.76
Chmp6P0C0A3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms