Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 BC023105-201ENSMUST00000073997 1227 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col3a1P08121 Gm25480-201ENSMUST00000083217 133 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.58□□□□□ -1.68
Col3a1P08121 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.58□□□□□ -1.68
Col3a1P08121 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col3a1P08121 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col3a1P08121 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.58□□□□□ -1.68
Col3a1P08121 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col3a1P08121 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Col3a1P08121 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Gm15060-201ENSMUST00000119550 948 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Gm12706-201ENSMUST00000121588 698 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col3a1P08121 Gm11358-201ENSMUST00000122310 373 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.57□□□□□ -1.68
Col3a1P08121 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Col3a1P08121 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC4.57□□□□□ -1.68
Col3a1P08121 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col3a1P08121 Gm2966-201ENSMUST00000166052 481 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Gm17204-201ENSMUST00000167936 478 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC4.57□□□□□ -1.68
Col3a1P08121 Gm26914-201ENSMUST00000182262 223 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.57□□□□□ -1.68
Col3a1P08121 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC4.57□□□□□ -1.68
Col3a1P08121 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 AC116465.1-201ENSMUST00000220324 235 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 AC192616.1-201ENSMUST00000221922 132 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Gm3565-201ENSMUST00000222670 609 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col3a1P08121 Mir504-201ENSMUST00000093602 79 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col3a1P08121 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 AC169038.1-201ENSMUST00000227378 1352 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Col3a1P08121 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Col3a1P08121 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col3a1P08121 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col3a1P08121 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col3a1P08121 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.57□□□□□ -1.68
Col3a1P08121 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col3a1P08121 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm11869-201ENSMUST00000118701 329 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm12691-201ENSMUST00000120186 456 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm9435-201ENSMUST00000120379 877 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm22311-201ENSMUST00000158006 110 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm9722-201ENSMUST00000194568 802 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm44694-201ENSMUST00000205317 1298 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm19073-201ENSMUST00000219978 555 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Platr25-208ENSMUST00000222602 939 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col3a1P08121 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col3a1P08121 Snord15a-201ENSMUST00000083888 148 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col3a1P08121 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col3a1P08121 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col3a1P08121 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col3a1P08121 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm22032-201ENSMUST00000116946 116 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm13607-201ENSMUST00000117875 539 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm11350-201ENSMUST00000121436 870 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col3a1P08121 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm23059-201ENSMUST00000158978 107 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm24925-201ENSMUST00000178157 107 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm27755-201ENSMUST00000184623 132 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm37989-201ENSMUST00000195202 803 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm7639-201ENSMUST00000212608 484 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Gm19137-201ENSMUST00000213790 1164 ntBASIC4.56□□□□□ -1.68
Col3a1P08121 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col3a1P08121 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.56□□□□□ -1.68
Col3a1P08121 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms