Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm14655-201ENSMUST00000120124 578 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm11448-201ENSMUST00000120427 450 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC4.3□□□□□ -1.72
Cbx4O55187 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.3□□□□□ -1.72
Cbx4O55187 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
Cbx4O55187 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.3□□□□□ -1.72
Cbx4O55187 Gm22859-201ENSMUST00000174978 122 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm23638-201ENSMUST00000175073 126 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm23158-201ENSMUST00000175076 126 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm22907-201ENSMUST00000175198 126 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm22625-201ENSMUST00000175382 126 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm22875-201ENSMUST00000175449 126 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm25197-201ENSMUST00000175516 126 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm27857-201ENSMUST00000176930 126 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm26268-201ENSMUST00000177685 126 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm15143-201ENSMUST00000178180 714 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm22776-201ENSMUST00000178634 94 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm23681-201ENSMUST00000178821 126 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm6900-201ENSMUST00000178971 342 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm23767-201ENSMUST00000179278 94 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm27940-201ENSMUST00000184449 98 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm29031-201ENSMUST00000185316 614 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm29000-201ENSMUST00000185444 614 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm28204-201ENSMUST00000185934 614 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm28290-201ENSMUST00000186505 614 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm28161-201ENSMUST00000186669 614 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.3□□□□□ -1.72
Cbx4O55187 Gm28749-209ENSMUST00000189599 614 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm33163-201ENSMUST00000194504 614 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm9238-201ENSMUST00000196181 329 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm42539-201ENSMUST00000197009 308 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.3□□□□□ -1.72
Cbx4O55187 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 AC141642.1-201ENSMUST00000220598 229 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 AC166358.6-201ENSMUST00000221834 1206 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 AC120540.1-201ENSMUST00000221879 324 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cbx4O55187 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cbx4O55187 Gm25404-201ENSMUST00000082970 107 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Gm24921-201ENSMUST00000083024 107 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cbx4O55187 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cbx4O55187 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.3□□□□□ -1.72
Cbx4O55187 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cbx4O55187 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cbx4O55187 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Cbx4O55187 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cbx4O55187 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cbx4O55187 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cbx4O55187 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cbx4O55187 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cbx4O55187 Gm25097-201ENSMUST00000104042 145 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm14107-201ENSMUST00000117774 330 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm14677-201ENSMUST00000117866 486 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm12697-201ENSMUST00000118008 667 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cbx4O55187 Gm26991-201ENSMUST00000180950 620 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm18667-201ENSMUST00000186523 484 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm29148-201ENSMUST00000188140 336 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cbx4O55187 Gm8403-201ENSMUST00000189712 1298 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm8823-201ENSMUST00000193158 433 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm37050-201ENSMUST00000193464 466 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.29□□□□□ -1.72
Cbx4O55187 Gm43489-201ENSMUST00000196810 993 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cbx4O55187 Gm44634-201ENSMUST00000206119 152 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm33626-201ENSMUST00000206790 828 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm46138-201ENSMUST00000215294 426 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.29□□□□□ -1.72
Cbx4O55187 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.29□□□□□ -1.72
Cbx4O55187 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
Cbx4O55187 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
Cbx4O55187 Gm25147-201ENSMUST00000083030 105 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cbx4O55187 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cbx4O55187 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cbx4O55187 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cbx4O55187 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Cbx4O55187 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cbx4O55187 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cbx4O55187 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.29□□□□□ -1.72
Cbx4O55187 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cbx4O55187 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cbx4O55187 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cbx4O55187 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.28□□□□□ -1.72
Cbx4O55187 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cbx4O55187 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Cbx4O55187 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.28□□□□□ -1.72
Cbx4O55187 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.28□□□□□ -1.72
Cbx4O55187 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Cbx4O55187 Gm24715-201ENSMUST00000102377 95 ntBASIC4.28□□□□□ -1.72
Cbx4O55187 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cbx4O55187 Gm13785-201ENSMUST00000119099 690 ntBASIC4.28□□□□□ -1.72
Cbx4O55187 Gm5384-201ENSMUST00000120313 463 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms