Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gm25965-201ENSMUST00000157170 93 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Gm26349-201ENSMUST00000157530 130 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Gm18522-201ENSMUST00000173947 650 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Gm6113-201ENSMUST00000180319 639 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Mir6411-201ENSMUST00000183556 108 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28625-201ENSMUST00000188309 205 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm45209-201ENSMUST00000207122 353 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.25□□□□□ -1.73
Ercc2O08811 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ercc2O08811 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ercc2O08811 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ercc2O08811 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ercc2O08811 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC4.25□□□□□ -1.73
Ercc2O08811 Snord22-201ENSMUST00000083153 126 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Mir504-201ENSMUST00000093602 79 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ercc2O08811 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.25□□□□□ -1.73
Ercc2O08811 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ercc2O08811 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ercc2O08811 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm6913-201ENSMUST00000100019 348 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm23431-201ENSMUST00000104006 107 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm23948-201ENSMUST00000104030 132 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.24□□□□□ -1.73
Ercc2O08811 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ercc2O08811 Gm15110-201ENSMUST00000117545 881 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm14795-201ENSMUST00000118461 471 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ercc2O08811 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm11448-201ENSMUST00000120427 450 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm14907-201ENSMUST00000121948 854 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm15212-201ENSMUST00000122403 466 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Ercc2O08811 Gm18358-201ENSMUST00000173179 1277 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.24□□□□□ -1.73
Ercc2O08811 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ercc2O08811 Gm22395-201ENSMUST00000177427 96 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm23215-201ENSMUST00000178153 121 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm27611-201ENSMUST00000184690 108 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ercc2O08811 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.24□□□□□ -1.73
Ercc2O08811 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.24□□□□□ -1.73
Ercc2O08811 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.24□□□□□ -1.73
Ercc2O08811 Gm18692-201ENSMUST00000193047 511 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm17887-201ENSMUST00000200194 547 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.24□□□□□ -1.73
Ercc2O08811 Gm18327-201ENSMUST00000202426 830 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm5338-201ENSMUST00000209530 639 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC4.24□□□□□ -1.73
Ercc2O08811 Gm35558-202ENSMUST00000221819 499 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.24□□□□□ -1.73
Ercc2O08811 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Ercc2O08811 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ercc2O08811 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ercc2O08811 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ercc2O08811 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ercc2O08811 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ercc2O08811 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ercc2O08811 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.24□□□□□ -1.73
Ercc2O08811 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms