Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm11346-201ENSMUST00000118346 704 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm13359-201ENSMUST00000119000 695 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm13887-201ENSMUST00000119009 344 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm12739-201ENSMUST00000119769 382 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm22885-201ENSMUST00000157410 107 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm24217-201ENSMUST00000158260 133 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm23505-201ENSMUST00000158989 130 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm15974-201ENSMUST00000159103 531 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm3531-201ENSMUST00000162698 489 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm25598-201ENSMUST00000179031 107 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Mir7022-201ENSMUST00000183749 61 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm8600-201ENSMUST00000186320 905 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm29524-201ENSMUST00000190819 699 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm38329-201ENSMUST00000193473 427 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm8929-201ENSMUST00000197781 1132 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm18452-201ENSMUST00000202968 1111 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm32308-201ENSMUST00000203053 280 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm6842-201ENSMUST00000211361 390 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 AC121986.1-201ENSMUST00000218588 781 ntBASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trem1Q9JKE2 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Trem1Q9JKE2 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Trem1Q9JKE2 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Trem1Q9JKE2 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Trem1Q9JKE2 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.59□□□□□ -1.84
Trem1Q9JKE2 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Trem1Q9JKE2 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.59□□□□□ -1.84
Trem1Q9JKE2 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.59□□□□□ -1.84
Trem1Q9JKE2 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
Trem1Q9JKE2 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm14607-201ENSMUST00000119119 491 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm14175-201ENSMUST00000119835 241 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Clec2f-201ENSMUST00000121051 374 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm8244-201ENSMUST00000121254 264 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm14383-201ENSMUST00000121637 386 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm14903-201ENSMUST00000122435 537 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm24537-201ENSMUST00000157950 102 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm18415-201ENSMUST00000177464 647 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm22243-201ENSMUST00000178754 120 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Mir6973b-201ENSMUST00000184185 80 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm7266-201ENSMUST00000187999 405 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm37631-201ENSMUST00000192275 364 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm43704-201ENSMUST00000196164 496 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm43368-201ENSMUST00000200638 409 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm46190-201ENSMUST00000219650 427 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm24950-201ENSMUST00000082768 191 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm23971-201ENSMUST00000083317 191 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm23849-201ENSMUST00000083833 191 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Gm26316-201ENSMUST00000083886 191 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.58□□□□□ -1.84
Trem1Q9JKE2 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trem1Q9JKE2 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm11914-201ENSMUST00000117094 507 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm13550-201ENSMUST00000118185 525 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm12719-201ENSMUST00000118859 241 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm12515-201ENSMUST00000120116 361 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms