Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm3454-201ENSMUST00000185571 412 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm6947-201ENSMUST00000186254 78 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.62□□□□□ -1.83
Lima1Q9ERG0 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm42758-201ENSMUST00000202146 283 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm3829-201ENSMUST00000222362 619 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm24626-201ENSMUST00000082621 161 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm26355-201ENSMUST00000158220 105 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm16101-201ENSMUST00000160695 430 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Mir5127-201ENSMUST00000175295 71 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm8296-201ENSMUST00000185597 524 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm37575-201ENSMUST00000195467 309 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm43604-201ENSMUST00000199799 705 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm2314-201ENSMUST00000200391 586 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm6240-201ENSMUST00000208014 473 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm18487-201ENSMUST00000215826 878 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.61□□□□□ -1.83
Lima1Q9ERG0 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm9308-201ENSMUST00000119073 448 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm12873-201ENSMUST00000119988 422 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm15885-201ENSMUST00000122114 388 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm14768-201ENSMUST00000122126 678 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm14905-201ENSMUST00000122351 639 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm22816-201ENSMUST00000157450 117 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Mir3620-201ENSMUST00000184710 61 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Mir6943-201ENSMUST00000185186 66 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm43559-201ENSMUST00000198755 466 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm35857-201ENSMUST00000212739 178 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm9472-201ENSMUST00000221625 526 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm18921-201ENSMUST00000221798 366 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm26165-201ENSMUST00000083791 138 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.6□□□□□ -1.83
Lima1Q9ERG0 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm22493-201ENSMUST00000104494 132 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm11874-201ENSMUST00000117437 130 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm14753-201ENSMUST00000118503 246 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm14570-201ENSMUST00000119444 391 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm14926-201ENSMUST00000120650 508 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm23959-201ENSMUST00000157208 324 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms