Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm25605-201ENSMUST00000158364 124 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm23365-201ENSMUST00000175019 125 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm25960-201ENSMUST00000175110 125 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm44453-201ENSMUST00000175161 126 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm25195-201ENSMUST00000177656 126 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm26746-201ENSMUST00000181722 487 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm20203-201ENSMUST00000192352 332 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm37603-201ENSMUST00000192368 219 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm17951-201ENSMUST00000198536 496 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm34091-201ENSMUST00000200875 604 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm3189-201ENSMUST00000205595 832 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm10237-201ENSMUST00000078393 273 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Mir193b-201ENSMUST00000103784 79 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm23273-201ENSMUST00000104058 135 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm12884-201ENSMUST00000120371 325 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm22816-201ENSMUST00000157450 117 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm23775-201ENSMUST00000158991 249 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm17177-201ENSMUST00000169144 483 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Mir7074-201ENSMUST00000183884 63 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm7449-201ENSMUST00000194393 663 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm43044-201ENSMUST00000198091 379 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm45553-201ENSMUST00000209929 507 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm45523-201ENSMUST00000210712 799 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm6841-201ENSMUST00000220602 598 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm23738-201ENSMUST00000082828 171 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm25147-201ENSMUST00000083030 105 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm26165-201ENSMUST00000083791 138 ntBASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hmgn3Q9DCB1 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm23271-201ENSMUST00000104052 124 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm11408-201ENSMUST00000117889 519 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm11393-201ENSMUST00000118019 288 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm15613-201ENSMUST00000118396 326 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm5762-201ENSMUST00000119204 258 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm22531-201ENSMUST00000158819 140 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm24819-201ENSMUST00000175094 166 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm28149-201ENSMUST00000187102 378 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm28768-201ENSMUST00000189034 378 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm6929-201ENSMUST00000210930 468 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.16□□□□□ -1.9
Hmgn3Q9DCB1 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms