Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm11406-201ENSMUST00000117418 484 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm15019-201ENSMUST00000120148 434 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm5384-201ENSMUST00000120313 463 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm14875-201ENSMUST00000120881 319 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm22889-201ENSMUST00000158639 58 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm7241-201ENSMUST00000159853 357 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm22398-201ENSMUST00000174941 125 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm25731-201ENSMUST00000175167 125 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm27718-201ENSMUST00000183721 86 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm37416-201ENSMUST00000193596 318 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm37791-201ENSMUST00000195081 286 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm3010-201ENSMUST00000198805 448 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm31532-201ENSMUST00000203555 767 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdc40Q9DC48 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm24142-201ENSMUST00000101960 107 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm23063-201ENSMUST00000102350 93 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm26418-201ENSMUST00000104275 137 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm13268-201ENSMUST00000117485 433 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm15885-201ENSMUST00000122114 388 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm11403-201ENSMUST00000122195 369 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm16303-201ENSMUST00000161498 390 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Mir7658-201ENSMUST00000184043 57 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm27733-201ENSMUST00000184803 68 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm29038-201ENSMUST00000191543 678 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm37111-201ENSMUST00000193250 634 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm44349-201ENSMUST00000197048 123 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm45031-201ENSMUST00000206800 288 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Mir370-201ENSMUST00000083499 79 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.61□□□□□ -1.83
Cdc40Q9DC48 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms