Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm11746-201ENSMUST00000119843 821 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm11404-201ENSMUST00000120872 494 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm13743-201ENSMUST00000121486 724 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm12226-201ENSMUST00000144172 876 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm24505-201ENSMUST00000157682 126 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm22840-201ENSMUST00000158444 136 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm20399-201ENSMUST00000174652 132 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm19791-201ENSMUST00000180398 859 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm28655-201ENSMUST00000191538 692 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm37603-201ENSMUST00000192368 219 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm38332-201ENSMUST00000194189 147 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm21006-201ENSMUST00000196930 667 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm7041-201ENSMUST00000201227 524 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm29815-201ENSMUST00000202418 178 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm45379-201ENSMUST00000211772 549 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm19599-201ENSMUST00000218898 358 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Chmp2aQ9DB34 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm14890-201ENSMUST00000117660 676 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm11923-201ENSMUST00000118135 508 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm12294-201ENSMUST00000119723 490 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm24380-201ENSMUST00000122696 324 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm22988-201ENSMUST00000122759 144 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm24244-201ENSMUST00000157317 130 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm24998-201ENSMUST00000157908 89 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm24976-201ENSMUST00000158972 135 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm16490-201ENSMUST00000165299 351 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm27033-201ENSMUST00000183226 544 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Mir6975-201ENSMUST00000184879 61 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm18406-201ENSMUST00000185872 669 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm38088-201ENSMUST00000195829 241 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm43090-201ENSMUST00000202459 314 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm8703-201ENSMUST00000203793 730 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp2aQ9DB34 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
Chmp2aQ9DB34 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Chmp2aQ9DB34 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.84□□□□□ -1.8
Chmp2aQ9DB34 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.84□□□□□ -1.8
Chmp2aQ9DB34 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Gm15018-201ENSMUST00000117090 633 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Gm15783-201ENSMUST00000117521 633 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Gm15387-201ENSMUST00000120421 648 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Gm16005-201ENSMUST00000120515 269 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Gm13460-201ENSMUST00000121274 353 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Gm24059-201ENSMUST00000157493 312 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Gm16303-201ENSMUST00000161498 390 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Gm28010-201ENSMUST00000179485 126 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.83□□□□□ -1.8
Chmp2aQ9DB34 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms