Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ccdc3Q9D6Y1 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ccdc3Q9D6Y1 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ccdc3Q9D6Y1 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ccdc3Q9D6Y1 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ccdc3Q9D6Y1 Gm14890-201ENSMUST00000117660 676 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm14621-201ENSMUST00000117709 689 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm11600-201ENSMUST00000119592 240 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm13170-201ENSMUST00000119716 643 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm13868-201ENSMUST00000122411 294 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm22219-201ENSMUST00000157562 319 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm26556-201ENSMUST00000180645 320 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm45031-201ENSMUST00000206800 288 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.65□□□□□ -1.83
Ccdc3Q9D6Y1 Gm12467-201ENSMUST00000117625 745 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm11408-201ENSMUST00000117889 519 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm8757-201ENSMUST00000119660 372 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm14875-201ENSMUST00000120881 319 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm13743-201ENSMUST00000121486 724 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm22988-201ENSMUST00000122759 144 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm6900-201ENSMUST00000178971 342 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm23860-201ENSMUST00000179446 132 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm9722-201ENSMUST00000194568 802 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Mir1892-201ENSMUST00000197752 80 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm45735-201ENSMUST00000212779 319 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm9472-201ENSMUST00000221625 526 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm3565-201ENSMUST00000222670 609 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm9309-201ENSMUST00000223537 546 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 CT030194.2-201ENSMUST00000225752 379 ntBASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc3Q9D6Y1 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm26476-201ENSMUST00000122618 313 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm23326-201ENSMUST00000157419 105 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm23667-201ENSMUST00000157466 120 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm26001-201ENSMUST00000157989 103 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm23666-201ENSMUST00000158053 116 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm23897-201ENSMUST00000158110 158 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm23702-201ENSMUST00000158840 130 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm21638-201ENSMUST00000179473 836 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms