Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm14815-201ENSMUST00000120060 488 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm13259-201ENSMUST00000120792 456 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm13345-201ENSMUST00000121928 228 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm15212-201ENSMUST00000122403 466 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm23465-201ENSMUST00000157134 262 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm25643-201ENSMUST00000158874 103 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Mir6413-201ENSMUST00000184049 108 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm29524-201ENSMUST00000190819 699 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm37682-201ENSMUST00000191776 522 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm18403-201ENSMUST00000192907 529 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm43849-201ENSMUST00000201086 215 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm44938-201ENSMUST00000208614 427 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm7351-201ENSMUST00000210745 580 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm18587-201ENSMUST00000213736 841 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm9318-201ENSMUST00000222444 438 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm6043-201ENSMUST00000099961 492 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim42Q9D2H5 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.67□□□□□ -1.5
Trim42Q9D2H5 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm22231-201ENSMUST00000101027 73 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm24586-201ENSMUST00000116695 89 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm24640-201ENSMUST00000116949 126 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm22626-201ENSMUST00000116990 126 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm15994-201ENSMUST00000118029 402 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm6584-201ENSMUST00000119671 447 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm15387-201ENSMUST00000120421 648 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm11879-201ENSMUST00000121885 702 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm13363-201ENSMUST00000122008 522 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm25365-201ENSMUST00000158852 121 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm24761-201ENSMUST00000179589 127 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm24488-201ENSMUST00000179934 127 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm25701-201ENSMUST00000179988 127 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm26431-201ENSMUST00000180199 127 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm26970-201ENSMUST00000182990 964 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm37336-202ENSMUST00000193705 468 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm32447-201ENSMUST00000194265 697 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm5842-201ENSMUST00000195073 622 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 BC049739-201ENSMUST00000202626 660 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm8132-201ENSMUST00000204938 640 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm18541-201ENSMUST00000215935 538 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 AC167229.1-201ENSMUST00000220057 469 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm18116-201ENSMUST00000220920 537 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Gm8288-201ENSMUST00000223406 593 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 AC133598.3-204ENSMUST00000224260 767 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Trim42Q9D2H5 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms