Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm7834-201ENSMUST00000117560 437 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm11698-201ENSMUST00000117948 455 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm11625-201ENSMUST00000119535 296 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Mir6411-201ENSMUST00000183556 108 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm29196-201ENSMUST00000189239 618 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm43580-201ENSMUST00000202892 284 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm44389-201ENSMUST00000203795 182 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm6112-201ENSMUST00000208037 629 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 AC113305.1-201ENSMUST00000214664 724 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm19134-201ENSMUST00000221203 487 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm14677-201ENSMUST00000117866 486 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm10444-201ENSMUST00000126708 148 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm26001-201ENSMUST00000157989 103 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm25555-201ENSMUST00000158078 111 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm8224-201ENSMUST00000166178 497 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm22395-201ENSMUST00000177427 96 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Mir6960-201ENSMUST00000183449 61 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Mir7028-201ENSMUST00000185016 64 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm6501-201ENSMUST00000187178 916 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm29479-201ENSMUST00000190352 455 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm19214-201ENSMUST00000191956 1083 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm19131-201ENSMUST00000203408 789 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm19366-201ENSMUST00000206996 156 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm19709-201ENSMUST00000215403 482 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm7540-201ENSMUST00000219764 926 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Mir202-201ENSMUST00000083568 72 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.43□□□□□ -1.7
Vps28Q9D1C8 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Svet1-201ENSMUST00000209370 3940 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms