Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm11862-201ENSMUST00000119678 659 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm14805-201ENSMUST00000120172 340 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm15781-201ENSMUST00000120216 323 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm5384-201ENSMUST00000120313 463 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm11363-201ENSMUST00000121672 548 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm25387-201ENSMUST00000157813 132 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm26490-201ENSMUST00000157879 140 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm10105-201ENSMUST00000184601 270 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Mir6952-201ENSMUST00000185092 61 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm18403-201ENSMUST00000192907 529 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm37430-201ENSMUST00000193039 196 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm43723-201ENSMUST00000196886 189 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm42694-201ENSMUST00000196951 358 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm17990-201ENSMUST00000211728 553 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm45710-201ENSMUST00000212847 215 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm20102-201ENSMUST00000222445 220 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Mir19a-201ENSMUST00000083482 82 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm22351-201ENSMUST00000083925 107 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm4017-201ENSMUST00000084813 338 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ssu72Q9CY97 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm13156-201ENSMUST00000118348 321 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm14669-201ENSMUST00000118841 250 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm14619-201ENSMUST00000120480 168 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm23211-201ENSMUST00000122717 308 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm25827-201ENSMUST00000157089 107 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm24965-201ENSMUST00000157922 106 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm23016-201ENSMUST00000158431 62 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm26404-201ENSMUST00000158498 109 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm23579-201ENSMUST00000158528 103 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm3470-201ENSMUST00000160819 420 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm20530-201ENSMUST00000174261 254 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm25243-201ENSMUST00000174912 207 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm27818-201ENSMUST00000184536 159 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm28069-201ENSMUST00000189926 214 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm43083-201ENSMUST00000199594 476 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm45173-201ENSMUST00000206819 305 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm18488-201ENSMUST00000215082 364 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm25853-201ENSMUST00000082793 132 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 AC160115.1-201ENSMUST00000224678 1574 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.2□□□□□ -1.58
Ssu72Q9CY97 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms