Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 AC139758.1-201ENSMUST00000226573 930 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm25739-201ENSMUST00000082886 107 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Mir30e-201ENSMUST00000083475 92 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Use1Q9CQ56 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm5943-201ENSMUST00000119458 459 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm15364-201ENSMUST00000119618 585 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm22036-201ENSMUST00000157279 215 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm7241-201ENSMUST00000159853 357 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Use1Q9CQ56 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm19418-201ENSMUST00000197436 580 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.64□□□□□ -1.83
Use1Q9CQ56 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Use1Q9CQ56 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Use1Q9CQ56 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm25726-201ENSMUST00000104529 129 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm15560-201ENSMUST00000117107 643 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm15075-201ENSMUST00000122187 477 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm24666-201ENSMUST00000158937 167 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm16571-201ENSMUST00000159112 291 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm2862-201ENSMUST00000161524 328 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm6155-201ENSMUST00000173735 341 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm26556-201ENSMUST00000180645 320 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm28196-201ENSMUST00000187719 640 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm28155-201ENSMUST00000191066 151 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm43370-201ENSMUST00000196437 284 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm45078-201ENSMUST00000205343 546 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm18462-201ENSMUST00000208112 417 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm17989-201ENSMUST00000211543 412 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm16419-201ENSMUST00000221057 625 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.63□□□□□ -1.83
Use1Q9CQ56 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Use1Q9CQ56 Gm25810-201ENSMUST00000082752 108 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms