Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm29545-201ENSMUST00000188878 694 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm37881-201ENSMUST00000193001 421 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm37418-201ENSMUST00000195031 274 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm9236-201ENSMUST00000196892 587 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm8319-201ENSMUST00000205708 641 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm45236-201ENSMUST00000208632 229 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm45530-201ENSMUST00000211658 225 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Olfr881-201ENSMUST00000074611 948 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Pcdha9Q91Y11 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm23608-201ENSMUST00000104545 128 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Mir208b-201ENSMUST00000104735 77 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm13162-201ENSMUST00000121481 454 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm24939-201ENSMUST00000158325 137 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Mir3062-201ENSMUST00000174986 105 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm25874-201ENSMUST00000178030 79 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm27861-201ENSMUST00000183920 214 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm17929-201ENSMUST00000186851 627 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm28872-201ENSMUST00000191518 158 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm8599-201ENSMUST00000193033 457 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm36954-201ENSMUST00000195362 363 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm19096-201ENSMUST00000209705 766 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm45857-201ENSMUST00000212207 356 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm3338-201ENSMUST00000220982 269 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Mir134-201ENSMUST00000083492 71 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Gm22829-201ENSMUST00000083771 106 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Pcdha9Q91Y11 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Pcdha9Q91Y11 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Pcdha9Q91Y11 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Pcdha9Q91Y11 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Pcdha9Q91Y11 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
Pcdha9Q91Y11 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
Pcdha9Q91Y11 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Pcdha9Q91Y11 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.9□□□□□ -1.62
Pcdha9Q91Y11 Gm22194-201ENSMUST00000116869 95 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Gm14854-201ENSMUST00000117758 841 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Gm15206-201ENSMUST00000119143 454 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Gm15168-201ENSMUST00000121057 316 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Gm5391-201ENSMUST00000121155 613 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Gm24441-201ENSMUST00000157235 281 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Gm24113-201ENSMUST00000157477 276 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Gm23496-201ENSMUST00000157741 248 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Gm22733-201ENSMUST00000158094 91 ntBASIC4.9□□□□□ -1.63
Pcdha9Q91Y11 Gm26354-201ENSMUST00000158221 129 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms