Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm11433-201ENSMUST00000118318 228 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm14473-201ENSMUST00000122269 557 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm22036-201ENSMUST00000157279 215 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm16147-201ENSMUST00000162143 373 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4□□□□□ -1.77
Vps39Q8R5L3 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Vps39Q8R5L3 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Vps39Q8R5L3 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Vps39Q8R5L3 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm21960-201ENSMUST00000181924 452 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm27875-201ENSMUST00000184425 123 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm27286-201ENSMUST00000184934 179 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm44857-201ENSMUST00000208331 196 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm20039-201ENSMUST00000210329 394 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4□□□□□ -1.77
Vps39Q8R5L3 AC117797.2-201ENSMUST00000224419 531 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 AC132112.1-201ENSMUST00000226354 505 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 CT025536.1-201ENSMUST00000226744 844 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm23846-201ENSMUST00000083835 107 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4□□□□□ -1.77
Vps39Q8R5L3 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Vps39Q8R5L3 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Vps39Q8R5L3 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Vps39Q8R5L3 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Vps39Q8R5L3 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4□□□□□ -1.77
Vps39Q8R5L3 Gm42447-201ENSMUST00000200102 2903 ntBASIC4□□□□□ -1.77
Vps39Q8R5L3 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm22778-201ENSMUST00000104090 128 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm13359-201ENSMUST00000119000 695 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm24666-201ENSMUST00000158937 167 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm6155-201ENSMUST00000173735 341 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm7897-201ENSMUST00000193981 554 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm37209-201ENSMUST00000194109 1276 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm4045-201ENSMUST00000204076 310 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 AC154198.1-201ENSMUST00000222839 424 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
Vps39Q8R5L3 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Mir804-201ENSMUST00000103251 95 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm25726-201ENSMUST00000104529 129 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm11488-201ENSMUST00000117277 863 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm14903-201ENSMUST00000122435 537 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm23957-201ENSMUST00000157209 90 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm20773-201ENSMUST00000178940 681 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm21070-201ENSMUST00000182425 985 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Mir6938-201ENSMUST00000184173 63 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Mir6986-201ENSMUST00000184483 58 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm18303-201ENSMUST00000190055 1176 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm38270-201ENSMUST00000192721 407 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.98□□□□□ -1.77
Vps39Q8R5L3 Gm9238-201ENSMUST00000196181 329 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Vps39Q8R5L3 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.98□□□□□ -1.77
Vps39Q8R5L3 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.98□□□□□ -1.77
Vps39Q8R5L3 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms