Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Ccdc28aQ8CEI3 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.68□□□□□ -1.82
Ccdc28aQ8CEI3 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm22269-201ENSMUST00000104002 130 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm26145-201ENSMUST00000104476 127 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm12931-201ENSMUST00000117046 324 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm13314-201ENSMUST00000118742 335 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm16005-201ENSMUST00000120515 269 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm25843-201ENSMUST00000122582 314 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Mir5127-201ENSMUST00000175295 71 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm25534-201ENSMUST00000175365 125 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm18486-201ENSMUST00000184040 298 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm28030-201ENSMUST00000184987 138 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm28655-201ENSMUST00000191538 692 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm43044-201ENSMUST00000198091 379 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm43559-201ENSMUST00000198755 466 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm45608-201ENSMUST00000210948 389 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm45327-201ENSMUST00000211612 565 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gm10242-201ENSMUST00000090064 330 ntBASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc28aQ8CEI3 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm5762-201ENSMUST00000119204 258 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm14788-201ENSMUST00000119457 375 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm15075-201ENSMUST00000122187 477 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm28010-201ENSMUST00000179485 126 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Mir6960-201ENSMUST00000183449 61 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm27189-201ENSMUST00000184119 190 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm44059-201ENSMUST00000204048 351 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm45209-201ENSMUST00000207122 353 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm45778-201ENSMUST00000211959 153 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.66□□□□□ -1.82
Ccdc28aQ8CEI3 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ccdc28aQ8CEI3 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ccdc28aQ8CEI3 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm22657-201ENSMUST00000104197 132 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm13167-201ENSMUST00000118554 578 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Mir3090-201ENSMUST00000175597 87 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Mir6414-201ENSMUST00000183685 82 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm27648-201ENSMUST00000184315 107 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm28615-201ENSMUST00000187527 482 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm28872-201ENSMUST00000191518 158 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm37791-201ENSMUST00000195081 286 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm44703-201ENSMUST00000205724 248 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm6230-201ENSMUST00000208077 780 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 AC142113.2-201ENSMUST00000217425 748 ntBASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc28aQ8CEI3 CT030662.3-201ENSMUST00000228751 476 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms