Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm14589-201ENSMUST00000121640 727 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm15899-201ENSMUST00000128586 238 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm9541-201ENSMUST00000188409 502 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm29479-201ENSMUST00000190352 455 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm37313-201ENSMUST00000191673 290 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm44972-201ENSMUST00000206419 406 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm44852-201ENSMUST00000207950 369 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm24921-201ENSMUST00000083024 107 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Mir181a-1-201ENSMUST00000083631 87 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp40Q8BWR4 Gm42955-201ENSMUST00000197355 3393 ntBASIC6.27□□□□□ -1.4
Usp40Q8BWR4 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Igkv13-87-201ENSMUST00000114214 286 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm23178-201ENSMUST00000116782 95 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm11878-201ENSMUST00000117908 400 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm11742-201ENSMUST00000119903 233 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm14600-201ENSMUST00000121032 630 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm14638-201ENSMUST00000121338 216 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm4912-201ENSMUST00000122212 1044 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm8121-201ENSMUST00000153583 499 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm25434-201ENSMUST00000158278 167 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm23024-201ENSMUST00000158770 292 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm27896-201ENSMUST00000175162 317 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm25397-201ENSMUST00000176951 92 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm27834-201ENSMUST00000183427 125 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm37586-201ENSMUST00000193654 204 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm37030-201ENSMUST00000194254 295 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm42830-201ENSMUST00000196642 313 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm18557-201ENSMUST00000218710 433 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 AC140930.4-201ENSMUST00000220750 150 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 n-R5s7-201ENSMUST00000083755 121 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Gm42494-201ENSMUST00000196515 3051 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Zfp640-202ENSMUST00000224116 1562 ntBASIC6.27□□□□□ -1.41
Usp40Q8BWR4 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm16394-201ENSMUST00000117289 675 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm13650-201ENSMUST00000117729 433 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm13311-201ENSMUST00000117863 379 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm15988-201ENSMUST00000118677 367 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms