Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm3933-201ENSMUST00000195391 439 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm8774-201ENSMUST00000203621 692 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm20039-201ENSMUST00000210329 394 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm11433-201ENSMUST00000118318 228 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm5942-201ENSMUST00000120046 439 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm22453-201ENSMUST00000122801 318 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm22036-201ENSMUST00000157279 215 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm20773-201ENSMUST00000178940 681 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm43476-201ENSMUST00000197873 405 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm35702-201ENSMUST00000198653 511 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm43975-201ENSMUST00000203023 481 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm44032-201ENSMUST00000204841 166 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc40Q8BI79 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm12587-201ENSMUST00000120180 427 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm24666-201ENSMUST00000158937 167 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm43855-201ENSMUST00000197462 507 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm44952-201ENSMUST00000204443 433 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm44703-201ENSMUST00000205724 248 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm19232-201ENSMUST00000211621 652 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 AC172027.1-201ENSMUST00000217659 337 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm25581-201ENSMUST00000083410 164 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Mir383-201ENSMUST00000083523 70 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm23846-201ENSMUST00000083835 107 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc40Q8BI79 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm11797-201ENSMUST00000121336 754 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm24592-201ENSMUST00000122505 106 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm23789-201ENSMUST00000122536 301 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm23205-201ENSMUST00000158671 103 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms