Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm15488-201ENSMUST00000121682 670 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm11834-201ENSMUST00000122257 585 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm23465-201ENSMUST00000157134 262 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm23385-201ENSMUST00000158592 295 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm15796-201ENSMUST00000162135 204 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm16490-201ENSMUST00000165299 351 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CtcfQ61164 Gm22243-201ENSMUST00000178754 120 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm29031-201ENSMUST00000185316 614 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm29000-201ENSMUST00000185444 614 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm28204-201ENSMUST00000185934 614 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm28290-201ENSMUST00000186505 614 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm28161-201ENSMUST00000186669 614 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CtcfQ61164 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.7□□□□□ -1.66
CtcfQ61164 Gm28749-209ENSMUST00000189599 614 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm29097-201ENSMUST00000190273 422 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm33163-201ENSMUST00000194504 614 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm17935-201ENSMUST00000196649 772 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm8209-201ENSMUST00000206386 553 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.7□□□□□ -1.66
CtcfQ61164 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CtcfQ61164 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC4.7□□□□□ -1.66
CtcfQ61164 Gm5176-202ENSMUST00000220267 583 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm7119-201ENSMUST00000221345 695 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm3333-202ENSMUST00000221763 1044 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CtcfQ61164 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC4.7□□□□□ -1.66
CtcfQ61164 AC122937.1-201ENSMUST00000226405 793 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 AC140393.2-201ENSMUST00000226894 943 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CtcfQ61164 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CtcfQ61164 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CtcfQ61164 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CtcfQ61164 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CtcfQ61164 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
CtcfQ61164 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
CtcfQ61164 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CtcfQ61164 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CtcfQ61164 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CtcfQ61164 Gm17132-201ENSMUST00000109542 1158 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CtcfQ61164 Gm14304-201ENSMUST00000117272 446 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm7834-201ENSMUST00000117560 437 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm16128-201ENSMUST00000117855 626 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm15385-201ENSMUST00000118725 667 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CtcfQ61164 Gm11708-201ENSMUST00000119530 832 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm13815-201ENSMUST00000119963 412 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.69□□□□□ -1.66
CtcfQ61164 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.69□□□□□ -1.66
CtcfQ61164 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CtcfQ61164 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.69□□□□□ -1.66
CtcfQ61164 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CtcfQ61164 Gm2930-201ENSMUST00000170403 474 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.69□□□□□ -1.66
CtcfQ61164 Gm22859-201ENSMUST00000174978 122 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm18397-201ENSMUST00000176704 587 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC4.69□□□□□ -1.66
CtcfQ61164 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
CtcfQ61164 Gm21816-201ENSMUST00000179255 360 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Mir6899-201ENSMUST00000184798 64 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Gm38080-201ENSMUST00000194035 268 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CtcfQ61164 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CtcfQ61164 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.69□□□□□ -1.66
CtcfQ61164 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 CT009765.2-201ENSMUST00000221331 392 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 AC114916.1-201ENSMUST00000228465 494 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Olfr815-201ENSMUST00000071557 951 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
CtcfQ61164 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CtcfQ61164 Gm22826-201ENSMUST00000083774 165 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CtcfQ61164 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CtcfQ61164 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CtcfQ61164 Synpr-207ENSMUST00000223583 3362 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms