Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Mir690-201ENSMUST00000102110 109 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm14172-201ENSMUST00000118255 644 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm25432-201ENSMUST00000158284 66 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm24930-201ENSMUST00000158315 83 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm10925-201ENSMUST00000189941 678 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm29475-201ENSMUST00000190767 312 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm37241-201ENSMUST00000191736 523 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Mir5121-201ENSMUST00000198528 74 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm8703-201ENSMUST00000203793 730 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 AC122937.1-201ENSMUST00000226405 793 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm10704-201ENSMUST00000098952 730 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim58Q5NCC9 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm14363-201ENSMUST00000122304 409 ntBASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm25438-201ENSMUST00000158281 110 ntBASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm26362-201ENSMUST00000158865 315 ntBASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm21742-201ENSMUST00000189352 548 ntBASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm18900-201ENSMUST00000193218 584 ntBASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm37239-201ENSMUST00000193510 141 ntBASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm18747-201ENSMUST00000198129 648 ntBASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.53□□□□□ -1.68
Trim58Q5NCC9 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
Trim58Q5NCC9 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
Trim58Q5NCC9 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm14810-201ENSMUST00000121628 486 ntBASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm23781-201ENSMUST00000157940 308 ntBASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Mir6899-201ENSMUST00000184798 64 ntBASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Trbv28-201ENSMUST00000192804 264 ntBASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm18193-201ENSMUST00000210017 772 ntBASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm4052-201ENSMUST00000220890 451 ntBASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Zmym2-202ENSMUST00000223669 1281 ntBASIC4.52□□□□□ -1.69
Trim58Q5NCC9 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm23623-201ENSMUST00000082461 107 ntBASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim58Q5NCC9 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Gm23063-201ENSMUST00000102350 93 ntBASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Gm5754-201ENSMUST00000118774 892 ntBASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Gm15026-201ENSMUST00000119219 458 ntBASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Gm11704-201ENSMUST00000120031 214 ntBASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC4.51□□□□□ -1.69
Trim58Q5NCC9 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Gm29038-201ENSMUST00000191543 678 ntBASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Gm42832-201ENSMUST00000196361 745 ntBASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Gm17937-201ENSMUST00000197908 742 ntBASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Trim58Q5NCC9 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms