Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm8475-201ENSMUST00000118211 526 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm11447-201ENSMUST00000118983 858 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm4234-201ENSMUST00000119747 714 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm12466-201ENSMUST00000121199 620 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm25748-201ENSMUST00000175487 70 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm20657-201ENSMUST00000177079 515 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 AC134468.2-201ENSMUST00000222549 672 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 AC173482.5-201ENSMUST00000224181 327 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Snord47-201ENSMUST00000083034 77 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm44586-201ENSMUST00000207166 2737 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm43842-201ENSMUST00000202890 2982 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm43874-201ENSMUST00000204853 2798 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm20345-201ENSMUST00000175839 2414 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm7079-201ENSMUST00000119726 171 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm22448-201ENSMUST00000179254 107 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm27266-201ENSMUST00000184521 123 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm45173-201ENSMUST00000206819 305 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm45405-201ENSMUST00000211544 609 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 AC159244.1-201ENSMUST00000220964 594 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm5321-201ENSMUST00000072050 447 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 mt-Ti-201ENSMUST00000082393 69 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm15084-201ENSMUST00000178585 1502 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Gm37773-201ENSMUST00000194141 2120 ntBASIC9.85□□□□□ -0.83
Trim41Q5NCC3 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 CT025686.2-201ENSMUST00000227898 3315 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm12871-201ENSMUST00000118758 438 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm22960-201ENSMUST00000122517 104 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm25665-201ENSMUST00000157695 110 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm27585-201ENSMUST00000183717 199 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Mir7658-201ENSMUST00000184043 57 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm9722-201ENSMUST00000194568 802 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm42570-201ENSMUST00000195937 292 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm29736-201ENSMUST00000198189 385 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm44307-201ENSMUST00000204466 764 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 CT030166.2-201ENSMUST00000222021 368 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm22807-201ENSMUST00000082737 129 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm8675-201ENSMUST00000201408 1856 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm37033-201ENSMUST00000193199 7350 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gm37999-201ENSMUST00000195178 1809 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim41Q5NCC3 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Gm45633-201ENSMUST00000210669 3253 ntBASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Gm6134-201ENSMUST00000117265 171 ntBASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Gm22519-201ENSMUST00000158270 178 ntBASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Gm27636-201ENSMUST00000184528 122 ntBASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Gm43286-201ENSMUST00000197420 424 ntBASIC9.83□□□□□ -0.84
Trim41Q5NCC3 Gm45070-201ENSMUST00000208100 246 ntBASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms