Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Gm12025-201ENSMUST00000117768 144 ntBASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Gm14562-201ENSMUST00000129885 543 ntBASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 AC158392.2-201ENSMUST00000225402 969 ntBASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Gm12010-201ENSMUST00000122400 2017 ntBASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88bQ4QRL3 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Gm14622-201ENSMUST00000117117 468 ntBASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Gm6969-201ENSMUST00000140065 342 ntBASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Gm8289-201ENSMUST00000144814 1182 ntBASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Gm24289-201ENSMUST00000157629 135 ntBASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Gm42993-201ENSMUST00000196856 7325 ntBASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc88bQ4QRL3 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 AC122840.2-201ENSMUST00000221030 2659 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Gm24914-201ENSMUST00000157285 313 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Gm24675-201ENSMUST00000158757 259 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Gm23028-201ENSMUST00000158773 265 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Gm5983-201ENSMUST00000197739 770 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Gm43932-201ENSMUST00000204499 52 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 AC144783.2-201ENSMUST00000219089 195 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 AC124729.1-201ENSMUST00000225327 976 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 AC115291.1-201ENSMUST00000226803 258 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Gm6545-201ENSMUST00000217186 1786 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc88bQ4QRL3 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 Gm13873-201ENSMUST00000119208 427 ntBASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 Gm13692-201ENSMUST00000120774 371 ntBASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 Gm14810-201ENSMUST00000121628 486 ntBASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 Gm9931-201ENSMUST00000193584 1185 ntBASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 Gm7624-201ENSMUST00000209702 435 ntBASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 Gm18225-201ENSMUST00000216708 742 ntBASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 AC126253.2-201ENSMUST00000226518 205 ntBASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.49
Ccdc88bQ4QRL3 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88bQ4QRL3 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88bQ4QRL3 Gm16420-201ENSMUST00000120258 856 ntBASIC5.71□□□□□ -1.5
Ccdc88bQ4QRL3 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc88bQ4QRL3 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC5.71□□□□□ -1.5
Ccdc88bQ4QRL3 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc88bQ4QRL3 AC162934.1-201ENSMUST00000222880 309 ntBASIC5.71□□□□□ -1.5
Ccdc88bQ4QRL3 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Gm12819-201ENSMUST00000122223 629 ntBASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Gm25967-201ENSMUST00000157168 147 ntBASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Gm28094-201ENSMUST00000185262 390 ntBASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Gm28069-201ENSMUST00000189926 214 ntBASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Snora70-201ENSMUST00000083047 137 ntBASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Mir504-201ENSMUST00000093602 79 ntBASIC5.7□□□□□ -1.5
Ccdc88bQ4QRL3 Gm44283-201ENSMUST00000204461 3950 ntBASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc88bQ4QRL3 AC108416.2-201ENSMUST00000226792 367 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms