Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm45651-201ENSMUST00000210857 335 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm45551-201ENSMUST00000211459 928 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 AC154452.1-201ENSMUST00000225819 241 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm24117-201ENSMUST00000103973 133 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm23608-201ENSMUST00000104545 128 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm13733-201ENSMUST00000117290 535 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm12520-201ENSMUST00000117493 316 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm15382-201ENSMUST00000118011 537 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm15126-201ENSMUST00000118631 833 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm4725-201ENSMUST00000151048 587 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm24113-201ENSMUST00000157477 276 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm23753-201ENSMUST00000157575 149 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm3851-201ENSMUST00000168653 318 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm17086-201ENSMUST00000171346 484 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Mir5103-201ENSMUST00000175111 79 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm22252-201ENSMUST00000179316 79 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm18800-202ENSMUST00000188688 1105 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm37709-201ENSMUST00000195074 600 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm36259-201ENSMUST00000197340 392 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm44703-201ENSMUST00000205724 248 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm17989-201ENSMUST00000211543 412 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 AC113305.1-201ENSMUST00000214664 724 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm29774-201ENSMUST00000219270 436 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 AC211878.2-201ENSMUST00000222486 488 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 CT009733.1-203ENSMUST00000224033 451 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim40Q3UWA4 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm12467-201ENSMUST00000117625 745 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm11878-201ENSMUST00000117908 400 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm4342-201ENSMUST00000118982 367 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Klra14-ps-201ENSMUST00000119532 802 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm5379-201ENSMUST00000120973 826 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm22135-201ENSMUST00000158752 108 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm21070-201ENSMUST00000182425 985 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 Gm4412-201ENSMUST00000186660 433 ntBASIC3.79□□□□□ -1.8
Trim40Q3UWA4 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim40Q3UWA4 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms