Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm24950-201ENSMUST00000082768 191 ntBASIC3.84□□□□□ -1.79
Trafd1Q3UDK1 Gm23971-201ENSMUST00000083317 191 ntBASIC3.84□□□□□ -1.79
Trafd1Q3UDK1 Gm23849-201ENSMUST00000083833 191 ntBASIC3.84□□□□□ -1.79
Trafd1Q3UDK1 Gm26316-201ENSMUST00000083886 191 ntBASIC3.84□□□□□ -1.79
Trafd1Q3UDK1 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.84□□□□□ -1.79
Trafd1Q3UDK1 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trafd1Q3UDK1 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trafd1Q3UDK1 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.84□□□□□ -1.8
Trafd1Q3UDK1 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Trafd1Q3UDK1 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Trafd1Q3UDK1 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm25317-201ENSMUST00000116824 129 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm11645-201ENSMUST00000121589 649 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm25966-201ENSMUST00000157169 117 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm6625-201ENSMUST00000177870 272 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm8600-201ENSMUST00000186320 905 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm29534-201ENSMUST00000187328 382 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm43853-201ENSMUST00000197162 301 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm42976-201ENSMUST00000200313 222 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm43155-201ENSMUST00000202661 494 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm45710-201ENSMUST00000212847 215 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.83□□□□□ -1.8
Trafd1Q3UDK1 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm23133-201ENSMUST00000104255 135 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm11673-201ENSMUST00000117846 331 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm13155-201ENSMUST00000119277 646 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm14605-201ENSMUST00000120599 268 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm15719-201ENSMUST00000120619 635 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm8178-201ENSMUST00000121570 646 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm4222-201ENSMUST00000165784 470 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm28267-201ENSMUST00000191093 265 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm37708-201ENSMUST00000192337 895 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm38008-201ENSMUST00000195333 518 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm43967-201ENSMUST00000203787 301 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 AC164629.1-201ENSMUST00000220250 1113 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Snora31-201ENSMUST00000083213 130 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm24319-201ENSMUST00000083389 107 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trafd1Q3UDK1 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms