Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Snord116l10-201ENSMUST00000179053 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm23767-201ENSMUST00000179278 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm24153-201ENSMUST00000179280 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm25597-201ENSMUST00000179388 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l1-201ENSMUST00000179518 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm22941-201ENSMUST00000179630 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm22631-201ENSMUST00000179656 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm25816-201ENSMUST00000179764 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l14-201ENSMUST00000179875 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l8-201ENSMUST00000179889 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l7-201ENSMUST00000179895 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l5-201ENSMUST00000179927 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l6-201ENSMUST00000179955 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm26188-201ENSMUST00000179963 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm25471-201ENSMUST00000180126 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm26433-201ENSMUST00000180227 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l11-201ENSMUST00000180312 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm23862-201ENSMUST00000180342 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm22128-201ENSMUST00000180346 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm28843-201ENSMUST00000189198 678 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm29546-201ENSMUST00000191171 678 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm37119-201ENSMUST00000195691 389 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm42805-201ENSMUST00000196158 276 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm42694-201ENSMUST00000196951 358 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm42458-201ENSMUST00000201914 369 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm43892-201ENSMUST00000204373 265 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm45189-201ENSMUST00000208567 363 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 AC163646.2-201ENSMUST00000227962 141 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 AC122887.2-201ENSMUST00000219465 1603 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm14918-201ENSMUST00000118153 268 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm14986-201ENSMUST00000121262 1002 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm11344-201ENSMUST00000122011 335 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm16345-201ENSMUST00000146065 158 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm26349-201ENSMUST00000157530 130 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm17054-201ENSMUST00000169811 259 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm22166-201ENSMUST00000178419 121 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm23288-201ENSMUST00000179213 121 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm23003-201ENSMUST00000179948 107 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm27313-201ENSMUST00000183500 142 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Mir6963-201ENSMUST00000183535 71 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm27551-201ENSMUST00000184258 77 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm18802-201ENSMUST00000186270 888 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm29552-201ENSMUST00000190548 660 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm29490-201ENSMUST00000190923 342 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm37111-201ENSMUST00000193250 634 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm9442-201ENSMUST00000194242 319 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm44465-201ENSMUST00000199536 114 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm42663-201ENSMUST00000199883 351 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm42896-201ENSMUST00000201249 1113 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.79□□□□□ -1.64
Usp39Q3TIX9 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Usp39Q3TIX9 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms