Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col9a1Q05722 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm44777-201ENSMUST00000205941 4052 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm6274-201ENSMUST00000118173 797 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm15195-201ENSMUST00000118775 263 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm23000-201ENSMUST00000157083 139 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm26362-201ENSMUST00000158865 315 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm26287-201ENSMUST00000158887 81 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm27875-201ENSMUST00000184425 123 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Mir195b-201ENSMUST00000184814 97 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm36946-201ENSMUST00000192706 435 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm6543-201ENSMUST00000197353 808 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm45405-201ENSMUST00000211544 609 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 AC159896.1-201ENSMUST00000215264 215 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm20368-201ENSMUST00000220716 301 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm7381-201ENSMUST00000098958 300 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm45555-201ENSMUST00000210028 2602 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm43871-201ENSMUST00000204931 1955 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col9a1Q05722 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col9a1Q05722 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col9a1Q05722 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Col9a1Q05722 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm15896-201ENSMUST00000118045 440 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm13265-201ENSMUST00000118090 421 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm13006-201ENSMUST00000118683 214 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm14871-201ENSMUST00000119056 194 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm6574-201ENSMUST00000120037 362 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm15037-201ENSMUST00000120358 259 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm23887-201ENSMUST00000122683 172 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm13901-201ENSMUST00000137252 468 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm17052-201ENSMUST00000165496 289 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Mirt2-201ENSMUST00000175179 285 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm27853-201ENSMUST00000184176 250 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm34073-201ENSMUST00000195736 212 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm43284-201ENSMUST00000200103 253 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.23□□□□□ -1.41
Col9a1Q05722 Supt4b-201ENSMUST00000214434 351 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 AC157515.1-201ENSMUST00000220953 450 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC6.23□□□□□ -1.41
Col9a1Q05722 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col9a1Q05722 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.23□□□□□ -1.41
Col9a1Q05722 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.23□□□□□ -1.41
Col9a1Q05722 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Col9a1Q05722 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col9a1Q05722 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.23□□□□□ -1.41
Col9a1Q05722 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col9a1Q05722 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.23□□□□□ -1.41
Col9a1Q05722 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm37192-201ENSMUST00000194479 1348 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.23□□□□□ -1.41
Col9a1Q05722 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col9a1Q05722 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col9a1Q05722 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm37879-201ENSMUST00000193112 1995 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col9a1Q05722 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col9a1Q05722 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col9a1Q05722 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col9a1Q05722 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm14537-201ENSMUST00000117464 599 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm13541-201ENSMUST00000119519 283 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 Gm12399-201ENSMUST00000121475 446 ntBASIC6.22□□□□□ -1.41
Col9a1Q05722 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 118.7 ms