Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm23461-201ENSMUST00000083265 107 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm24029-201ENSMUST00000083928 143 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Olfr895-201ENSMUST00000093864 951 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm16270-201ENSMUST00000160327 3238 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm38137-201ENSMUST00000193735 1401 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm10241-201ENSMUST00000117664 286 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm11346-201ENSMUST00000118346 704 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm12448-201ENSMUST00000118852 655 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm14731-201ENSMUST00000119216 376 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm7079-201ENSMUST00000119726 171 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm15167-201ENSMUST00000121997 187 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm16345-201ENSMUST00000146065 158 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm15900-201ENSMUST00000161584 342 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm17421-201ENSMUST00000167845 674 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm8214-201ENSMUST00000172123 351 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm22650-201ENSMUST00000175138 105 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm28257-201ENSMUST00000185244 463 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm20056-201ENSMUST00000194813 519 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm32453-201ENSMUST00000204183 456 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm44853-201ENSMUST00000209070 250 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm7128-201ENSMUST00000211639 533 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm18703-201ENSMUST00000215318 333 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 AC154271.1-201ENSMUST00000224780 383 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Col8a1Q00780 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.61□□□□□ -1.67
Col8a1Q00780 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Col8a1Q00780 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col8a1Q00780 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm44660-201ENSMUST00000207134 2465 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm25213-201ENSMUST00000102388 113 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm11813-201ENSMUST00000118586 291 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm11794-201ENSMUST00000119446 237 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm7363-201ENSMUST00000119883 399 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm5405-201ENSMUST00000120478 609 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col8a1Q00780 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm24905-201ENSMUST00000158129 104 ntBASIC4.6□□□□□ -1.67
Col8a1Q00780 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col8a1Q00780 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms