Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cux1P53564 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC5.3□□□□□ -1.56
Cux1P53564 AC150314.1-201ENSMUST00000214798 238 ntBASIC5.3□□□□□ -1.56
Cux1P53564 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.3□□□□□ -1.56
Cux1P53564 AC154515.2-201ENSMUST00000226093 406 ntBASIC5.3□□□□□ -1.56
Cux1P53564 AC118639.1-204ENSMUST00000226401 694 ntBASIC5.3□□□□□ -1.56
Cux1P53564 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cux1P53564 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cux1P53564 Gm26129-201ENSMUST00000082719 107 ntBASIC5.3□□□□□ -1.56
Cux1P53564 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cux1P53564 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cux1P53564 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Cux1P53564 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.29□□□□□ -1.56
Cux1P53564 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cux1P53564 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Cux1P53564 Gm13761-201ENSMUST00000117238 807 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Gm14570-201ENSMUST00000119444 391 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Gm12819-201ENSMUST00000122223 629 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cux1P53564 Gm23671-201ENSMUST00000157472 103 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cux1P53564 Gm20672-201ENSMUST00000176605 261 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Gm21960-201ENSMUST00000181924 452 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Gm45031-201ENSMUST00000206800 288 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC5.29□□□□□ -1.56
Cux1P53564 Gm17989-201ENSMUST00000211543 412 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cux1P53564 Olfr895-201ENSMUST00000093864 951 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cux1P53564 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.29□□□□□ -1.56
Cux1P53564 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cux1P53564 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cux1P53564 Gm18359-201ENSMUST00000173024 1459 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Gm38699-201ENSMUST00000221301 1740 ntBASIC5.29□□□□□ -1.56
Cux1P53564 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cux1P53564 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cux1P53564 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cux1P53564 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cux1P53564 Gm11488-201ENSMUST00000117277 863 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Gm9208-201ENSMUST00000120468 948 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Gm15466-201ENSMUST00000122299 333 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC5.28□□□□□ -1.56
Cux1P53564 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cux1P53564 Gm37081-201ENSMUST00000192034 196 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Gm43232-201ENSMUST00000201346 364 ntBASIC5.28□□□□□ -1.56
Cux1P53564 AC140785.1-201ENSMUST00000217782 383 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Gm43032-201ENSMUST00000197967 3123 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cux1P53564 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cux1P53564 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cux1P53564 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Cux1P53564 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cux1P53564 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cux1P53564 Gm43875-201ENSMUST00000203319 2475 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cux1P53564 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cux1P53564 Mir1198-201ENSMUST00000116995 121 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Gm12268-201ENSMUST00000118398 442 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Snord92-201ENSMUST00000175548 85 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Gm8600-201ENSMUST00000186320 905 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Gm29105-201ENSMUST00000187256 450 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cux1P53564 Gm43930-201ENSMUST00000203868 845 ntBASIC5.28□□□□□ -1.56
Cux1P53564 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cux1P53564 AC132237.1-201ENSMUST00000220950 4475 ntBASIC5.27□□□□□ -1.57
Cux1P53564 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cux1P53564 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cux1P53564 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cux1P53564 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cux1P53564 Gm14647-201ENSMUST00000119392 680 ntBASIC5.27□□□□□ -1.57
Cux1P53564 Gm5943-201ENSMUST00000119458 459 ntBASIC5.27□□□□□ -1.57
Cux1P53564 Gm9931-201ENSMUST00000193584 1185 ntBASIC5.27□□□□□ -1.57
Cux1P53564 Gm43829-201ENSMUST00000196191 3802 ntBASIC5.27□□□□□ -1.57
Cux1P53564 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC5.27□□□□□ -1.57
Cux1P53564 Gm44964-201ENSMUST00000207011 273 ntBASIC5.27□□□□□ -1.57
Cux1P53564 Gm44690-201ENSMUST00000207984 382 ntBASIC5.27□□□□□ -1.57
Cux1P53564 AC173115.1-201ENSMUST00000220835 211 ntBASIC5.27□□□□□ -1.57
Cux1P53564 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.27□□□□□ -1.57
Cux1P53564 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Cux1P53564 Gm44283-201ENSMUST00000204461 3950 ntBASIC5.26□□□□□ -1.57
Cux1P53564 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cux1P53564 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Cux1P53564 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cux1P53564 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cux1P53564 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC5.26□□□□□ -1.57
Cux1P53564 Gm27893-201ENSMUST00000184408 194 ntBASIC5.26□□□□□ -1.57
Cux1P53564 Gm27445-201ENSMUST00000184484 72 ntBASIC5.26□□□□□ -1.57
Cux1P53564 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC5.26□□□□□ -1.57
Cux1P53564 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cux1P53564 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cux1P53564 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.26□□□□□ -1.57
Cux1P53564 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cux1P53564 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cux1P53564 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cux1P53564 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cux1P53564 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Cux1P53564 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cux1P53564 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms