Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm27387-201ENSMUST00000184583 116 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm29634-201ENSMUST00000188467 696 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm28474-201ENSMUST00000188501 315 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm28699-201ENSMUST00000189193 696 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm20811-201ENSMUST00000190500 553 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm18291-201ENSMUST00000190791 301 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Mir142-201ENSMUST00000198092 64 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm5034-201ENSMUST00000199115 634 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.06□□□□□ -1.6
Shmt1P50431 Gm19096-201ENSMUST00000209705 766 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Shmt1P50431 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Shmt1P50431 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC5.06□□□□□ -1.6
Shmt1P50431 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Shmt1P50431 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Shmt1P50431 Gm24031-201ENSMUST00000083930 131 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Shmt1P50431 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Shmt1P50431 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Shmt1P50431 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Shmt1P50431 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Shmt1P50431 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Shmt1P50431 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Shmt1P50431 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Shmt1P50431 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Shmt1P50431 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Shmt1P50431 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Shmt1P50431 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Shmt1P50431 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Shmt1P50431 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm14082-201ENSMUST00000118582 801 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Gm8757-201ENSMUST00000119660 372 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Gm11606-201ENSMUST00000120706 617 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm23501-201ENSMUST00000157744 256 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Gm25923-201ENSMUST00000158312 138 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Gm25714-201ENSMUST00000158626 296 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Shmt1P50431 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm27976-201ENSMUST00000183635 162 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm27332-201ENSMUST00000184893 112 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Shmt1P50431 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm37030-201ENSMUST00000194254 295 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Gm43315-201ENSMUST00000198120 313 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Gm44816-201ENSMUST00000206666 477 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Shmt1P50431 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Shmt1P50431 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Shmt1P50431 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.05□□□□□ -1.6
Shmt1P50431 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Shmt1P50431 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Shmt1P50431 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Shmt1P50431 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Shmt1P50431 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.05□□□□□ -1.6
Shmt1P50431 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Shmt1P50431 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Shmt1P50431 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Shmt1P50431 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm14575-201ENSMUST00000117210 560 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Gm11633-201ENSMUST00000118176 444 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Gm15060-201ENSMUST00000119550 948 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Gm14530-201ENSMUST00000122391 333 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm22519-201ENSMUST00000158270 178 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Gm22940-201ENSMUST00000158560 155 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Shmt1P50431 Gm9613-201ENSMUST00000171662 196 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.04□□□□□ -1.6
Shmt1P50431 Gm20428-201ENSMUST00000174365 283 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms