Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC5.14□□□□□ -1.59
Ercc3P49135 Gm14649-201ENSMUST00000121814 324 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ercc3P49135 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.14□□□□□ -1.59
Ercc3P49135 Gm16134-201ENSMUST00000161714 336 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.14□□□□□ -1.59
Ercc3P49135 Gm8221-201ENSMUST00000178052 564 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Gm27414-201ENSMUST00000185033 381 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC5.14□□□□□ -1.59
Ercc3P49135 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ercc3P49135 Gm29479-201ENSMUST00000190352 455 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Gm37050-201ENSMUST00000193464 466 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.14□□□□□ -1.59
Ercc3P49135 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Gm18861-201ENSMUST00000202509 1186 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Gm5317-201ENSMUST00000204445 847 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Gm44092-201ENSMUST00000204470 258 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Gm6112-201ENSMUST00000208037 629 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 AC153932.1-201ENSMUST00000218558 787 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ercc3P49135 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC5.14□□□□□ -1.59
Ercc3P49135 Gm25699-201ENSMUST00000082896 167 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 Mir346-201ENSMUST00000083547 98 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ercc3P49135 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ercc3P49135 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ercc3P49135 AC091683.1-201ENSMUST00000222307 2446 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 AC155921.1-201ENSMUST00000216568 3841 ntBASIC5.14□□□□□ -1.59
Ercc3P49135 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC5.14□□□□□ -1.59
Ercc3P49135 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ercc3P49135 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ercc3P49135 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ercc3P49135 Gm14795-201ENSMUST00000118461 471 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm14559-201ENSMUST00000121745 496 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm13092-201ENSMUST00000136346 260 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm6969-201ENSMUST00000140065 342 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm23754-201ENSMUST00000157576 63 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm16558-201ENSMUST00000163015 532 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm4222-201ENSMUST00000165784 470 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ercc3P49135 Gm27538-201ENSMUST00000185065 294 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm29320-201ENSMUST00000185235 615 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm29179-202ENSMUST00000186138 615 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm29448-201ENSMUST00000186675 615 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm29314-201ENSMUST00000186800 615 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm28253-202ENSMUST00000187971 615 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Ercc3P49135 Gm28190-201ENSMUST00000189766 722 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm29169-201ENSMUST00000189835 615 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm29038-201ENSMUST00000191543 678 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC5.13□□□□□ -1.59
Ercc3P49135 Gm43214-201ENSMUST00000199242 352 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm5876-201ENSMUST00000203735 243 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC5.13□□□□□ -1.59
Ercc3P49135 Gm6303-201ENSMUST00000210123 471 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC5.13□□□□□ -1.59
Ercc3P49135 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC5.13□□□□□ -1.59
Ercc3P49135 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ercc3P49135 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ercc3P49135 Gm23447-201ENSMUST00000082798 163 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 n-R5s151-201ENSMUST00000083959 119 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ercc3P49135 Gm42717-201ENSMUST00000197309 3463 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Gm37747-201ENSMUST00000193717 4003 ntBASIC5.13□□□□□ -1.59
Ercc3P49135 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Ercc3P49135 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ercc3P49135 Gm44542-201ENSMUST00000208677 4314 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ercc3P49135 Gm26367-201ENSMUST00000104165 132 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Mir105-201ENSMUST00000104655 80 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm7834-201ENSMUST00000117560 437 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm13379-201ENSMUST00000118053 621 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm12571-201ENSMUST00000118132 243 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm15387-201ENSMUST00000120421 648 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm11252-201ENSMUST00000120572 939 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm22208-201ENSMUST00000122658 110 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm16250-201ENSMUST00000148974 256 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm24939-201ENSMUST00000158325 137 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm25264-201ENSMUST00000158519 117 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm15795-201ENSMUST00000160969 553 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ercc3P49135 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.12□□□□□ -1.59
Ercc3P49135 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC5.12□□□□□ -1.59
Ercc3P49135 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ercc3P49135 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ercc3P49135 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.12□□□□□ -1.59
Ercc3P49135 Gm37164-201ENSMUST00000192809 637 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms