Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm22597-201ENSMUST00000157602 80 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Mir1946a-201ENSMUST00000158360 134 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm3030-201ENSMUST00000163410 516 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm3605-201ENSMUST00000185858 440 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Gm37495-201ENSMUST00000194590 264 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Gm37817-201ENSMUST00000195276 434 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm43710-201ENSMUST00000199583 452 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Gm6112-201ENSMUST00000208037 629 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Gm45312-201ENSMUST00000210566 311 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC6.23□□□□□ -1.41
Rfx1P48377 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Gm23927-201ENSMUST00000082466 215 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Rfx1P48377 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Rfx1P48377 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Rfx1P48377 AC159326.1-201ENSMUST00000219989 1302 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm44679-201ENSMUST00000207202 2908 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx1P48377 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC6.22□□□□□ -1.41
Rfx1P48377 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rfx1P48377 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx1P48377 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx1P48377 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Rfx1P48377 Gm24120-201ENSMUST00000103978 129 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm12245-201ENSMUST00000117266 357 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm11859-201ENSMUST00000118099 455 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm12837-201ENSMUST00000120131 373 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm14428-201ENSMUST00000120408 822 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm13406-201ENSMUST00000121991 256 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 n-R5s61-201ENSMUST00000122711 118 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC6.22□□□□□ -1.41
Rfx1P48377 Gm26489-201ENSMUST00000157880 264 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx1P48377 Gm22655-201ENSMUST00000174949 96 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm8221-201ENSMUST00000178052 564 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rfx1P48377 Gm23144-201ENSMUST00000180226 107 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Mir7653-201ENSMUST00000184358 61 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC6.22□□□□□ -1.41
Rfx1P48377 Gm38050-201ENSMUST00000191904 238 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx1P48377 Gm42566-201ENSMUST00000197120 643 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm44295-201ENSMUST00000203805 437 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC6.22□□□□□ -1.41
Rfx1P48377 Gm8319-201ENSMUST00000205708 641 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm45185-201ENSMUST00000207556 404 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.22□□□□□ -1.41
Rfx1P48377 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm9068-201ENSMUST00000217393 455 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC6.22□□□□□ -1.41
Rfx1P48377 AC131029.2-202ENSMUST00000228430 496 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 AC154627.3-201ENSMUST00000228441 334 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rfx1P48377 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Rfx1P48377 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Rfx1P48377 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Rfx1P48377 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Rfx1P48377 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rfx1P48377 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rfx1P48377 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 AC112274.1-201ENSMUST00000218957 4274 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Gm37393-201ENSMUST00000195118 3870 ntBASIC6.22□□□□□ -1.41
Rfx1P48377 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Rfx1P48377 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Rfx1P48377 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Rfx1P48377 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Rfx1P48377 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Rfx1P48377 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Rfx1P48377 Gm26396-201ENSMUST00000104093 132 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Rfx1P48377 Gm14987-201ENSMUST00000117820 676 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm12053-201ENSMUST00000119022 252 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm6797-201ENSMUST00000119440 512 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm23124-201ENSMUST00000157650 107 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm22724-201ENSMUST00000158091 127 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm22122-201ENSMUST00000175147 200 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Rfx1P48377 Gm25397-201ENSMUST00000176951 92 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm4076-201ENSMUST00000179230 965 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Rfx1P48377 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm28390-201ENSMUST00000185212 700 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Rfx1P48377 Gm37659-201ENSMUST00000194574 111 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm37445-201ENSMUST00000195318 242 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm42758-201ENSMUST00000202146 283 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm43501-201ENSMUST00000202513 107 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC6.21□□□□□ -1.42
Rfx1P48377 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC6.21□□□□□ -1.42
Rfx1P48377 Gm45422-201ENSMUST00000211476 246 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms