Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm23530-201ENSMUST00000104564 137 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm14534-201ENSMUST00000120045 357 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm12543-201ENSMUST00000120410 543 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC3.52□□□□□ -1.85
Cdx2P43241 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Cdx2P43241 Gm27592-201ENSMUST00000157729 126 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm24739-201ENSMUST00000158855 292 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm22174-201ENSMUST00000175050 125 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm22692-201ENSMUST00000175055 125 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm27634-201ENSMUST00000175060 126 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm26460-201ENSMUST00000175061 126 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm22460-201ENSMUST00000175269 124 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm24365-201ENSMUST00000175384 125 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm44310-201ENSMUST00000175424 126 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm22639-201ENSMUST00000175591 125 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm24979-201ENSMUST00000178626 126 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdx2P43241 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdx2P43241 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.52□□□□□ -1.85
Cdx2P43241 Gm27743-201ENSMUST00000185136 126 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm9775-201ENSMUST00000189402 331 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm37720-201ENSMUST00000195497 1241 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm44084-201ENSMUST00000203947 409 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC3.52□□□□□ -1.85
Cdx2P43241 Gm9712-201ENSMUST00000210842 311 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm45327-201ENSMUST00000211612 565 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Cdx2P43241 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Cdx2P43241 AC126554.4-201ENSMUST00000221055 409 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm2710-201ENSMUST00000073196 603 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm10237-201ENSMUST00000078393 273 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 AF357428-201ENSMUST00000083815 69 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Gm25630-201ENSMUST00000084000 162 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdx2P43241 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdx2P43241 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdx2P43241 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Cdx2P43241 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdx2P43241 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Cdx2P43241 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Cdx2P43241 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.52□□□□□ -1.85
Cdx2P43241 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Cdx2P43241 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Cdx2P43241 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Cdx2P43241 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Cdx2P43241 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Cdx2P43241 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Cdx2P43241 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Gm25376-201ENSMUST00000104340 133 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Gm23532-201ENSMUST00000104569 112 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Gm13771-201ENSMUST00000117988 238 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx2P43241 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx2P43241 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.51□□□□□ -1.85
Cdx2P43241 Gm24441-201ENSMUST00000157235 281 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx2P43241 Gm5368-201ENSMUST00000189012 589 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Gm37698-201ENSMUST00000192605 463 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.51□□□□□ -1.85
Cdx2P43241 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx2P43241 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx2P43241 Gm23623-201ENSMUST00000082461 107 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Snord15a-201ENSMUST00000083888 148 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Cdx2P43241 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.51□□□□□ -1.85
Cdx2P43241 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Cdx2P43241 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdx2P43241 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.51□□□□□ -1.85
Cdx2P43241 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
Cdx2P43241 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
Cdx2P43241 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdx2P43241 Gm26387-201ENSMUST00000104238 132 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdx2P43241 Gm9157-201ENSMUST00000117673 225 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Gm11598-201ENSMUST00000119257 357 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Gm13687-201ENSMUST00000119857 282 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Gm12412-201ENSMUST00000121867 328 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 n-R5s30-201ENSMUST00000122624 122 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.5□□□□□ -1.85
Cdx2P43241 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.5□□□□□ -1.85
Cdx2P43241 Mir6993-201ENSMUST00000184912 65 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.5□□□□□ -1.85
Cdx2P43241 Gm21006-201ENSMUST00000196930 667 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Gm44773-201ENSMUST00000207374 557 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Gm9765-201ENSMUST00000043170 321 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Cdx2P43241 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Cdx2P43241 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.5□□□□□ -1.85
Cdx2P43241 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms