Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.78□□□□□ -1.64
Traf1P39428 Gm18704-201ENSMUST00000219736 446 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 AC160999.1-201ENSMUST00000225675 810 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Traf1P39428 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Traf1P39428 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Traf1P39428 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
Traf1P39428 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.78□□□□□ -1.64
Traf1P39428 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Traf1P39428 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Traf1P39428 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.77□□□□□ -1.65
Traf1P39428 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Traf1P39428 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Traf1P39428 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Traf1P39428 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Traf1P39428 Gm14473-201ENSMUST00000122269 557 ntBASIC4.77□□□□□ -1.65
Traf1P39428 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Traf1P39428 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC4.77□□□□□ -1.65
Traf1P39428 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Traf1P39428 Mir6345-201ENSMUST00000184286 128 ntBASIC4.77□□□□□ -1.65
Traf1P39428 Gm28190-201ENSMUST00000189766 722 ntBASIC4.77□□□□□ -1.65
Traf1P39428 Gm9722-201ENSMUST00000194568 802 ntBASIC4.77□□□□□ -1.65
Traf1P39428 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Traf1P39428 Gm44871-201ENSMUST00000207821 497 ntBASIC4.77□□□□□ -1.65
Traf1P39428 Gm34005-201ENSMUST00000215834 282 ntBASIC4.77□□□□□ -1.65
Traf1P39428 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.77□□□□□ -1.65
Traf1P39428 AC153522.1-201ENSMUST00000220047 1090 ntBASIC4.77□□□□□ -1.65
Traf1P39428 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.77□□□□□ -1.65
Traf1P39428 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.77□□□□□ -1.65
Traf1P39428 AC133654.1-201ENSMUST00000228411 672 ntBASIC4.77□□□□□ -1.65
Traf1P39428 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.77□□□□□ -1.65
Traf1P39428 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Traf1P39428 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Traf1P39428 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.77□□□□□ -1.65
Traf1P39428 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Traf1P39428 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Traf1P39428 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.77□□□□□ -1.65
Traf1P39428 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Traf1P39428 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Traf1P39428 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Traf1P39428 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Traf1P39428 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.77□□□□□ -1.65
Traf1P39428 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Traf1P39428 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Traf1P39428 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Traf1P39428 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Traf1P39428 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.76□□□□□ -1.65
Traf1P39428 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.76□□□□□ -1.65
Traf1P39428 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Traf1P39428 Gm12507-201ENSMUST00000119155 415 ntBASIC4.76□□□□□ -1.65
Traf1P39428 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Traf1P39428 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Traf1P39428 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm16563-201ENSMUST00000162673 423 ntBASIC4.76□□□□□ -1.65
Traf1P39428 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.76□□□□□ -1.65
Traf1P39428 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm2092-201ENSMUST00000178887 639 ntBASIC4.76□□□□□ -1.65
Traf1P39428 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm2759-201ENSMUST00000179938 639 ntBASIC4.76□□□□□ -1.65
Traf1P39428 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm10292-201ENSMUST00000183142 581 ntBASIC4.76□□□□□ -1.65
Traf1P39428 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.76□□□□□ -1.65
Traf1P39428 Gm43424-201ENSMUST00000200484 253 ntBASIC4.76□□□□□ -1.65
Traf1P39428 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Traf1P39428 Gm9373-201ENSMUST00000208724 599 ntBASIC4.76□□□□□ -1.65
Traf1P39428 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Traf1P39428 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Traf1P39428 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Traf1P39428 Gm25800-201ENSMUST00000082636 134 ntBASIC4.76□□□□□ -1.65
Traf1P39428 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.76□□□□□ -1.65
Traf1P39428 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Traf1P39428 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Traf1P39428 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Traf1P39428 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.76□□□□□ -1.65
Traf1P39428 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Traf1P39428 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Traf1P39428 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.76□□□□□ -1.65
Traf1P39428 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.76□□□□□ -1.65
Traf1P39428 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms