Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
P20040 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.51□□□□□ -1.85
P20040 Gm45523-201ENSMUST00000210712 799 ntBASIC3.51□□□□□ -1.85
P20040 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
P20040 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.51□□□□□ -1.85
P20040 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.51□□□□□ -1.85
P20040 Gm31931-201ENSMUST00000219666 222 ntBASIC3.51□□□□□ -1.85
P20040 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
P20040 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
P20040 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
P20040 Mir34b-201ENSMUST00000083558 84 ntBASIC3.51□□□□□ -1.85
P20040 Gm23846-201ENSMUST00000083835 107 ntBASIC3.51□□□□□ -1.85
P20040 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
P20040 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
P20040 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.51□□□□□ -1.85
P20040 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
P20040 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
P20040 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
P20040 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.5□□□□□ -1.85
P20040 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.5□□□□□ -1.85
P20040 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
P20040 Mir551b-201ENSMUST00000102165 98 ntBASIC3.5□□□□□ -1.85
P20040 Mir804-201ENSMUST00000103251 95 ntBASIC3.5□□□□□ -1.85
P20040 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
P20040 Gm22019-201ENSMUST00000104359 96 ntBASIC3.5□□□□□ -1.85
P20040 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.5□□□□□ -1.85
P20040 Gm8666-201ENSMUST00000117517 292 ntBASIC3.5□□□□□ -1.85
P20040 Gm15382-201ENSMUST00000118011 537 ntBASIC3.5□□□□□ -1.85
P20040 Gm14541-201ENSMUST00000118985 157 ntBASIC3.5□□□□□ -1.85
P20040 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.5□□□□□ -1.85
P20040 Gm9003-201ENSMUST00000121810 482 ntBASIC3.5□□□□□ -1.85
P20040 Gm11344-201ENSMUST00000122011 335 ntBASIC3.5□□□□□ -1.85
P20040 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.5□□□□□ -1.85
P20040 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.5□□□□□ -1.85
P20040 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
P20040 Gm23957-201ENSMUST00000157209 90 ntBASIC3.5□□□□□ -1.85
P20040 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.5□□□□□ -1.85
P20040 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.5□□□□□ -1.85
P20040 Mir6715-201ENSMUST00000184990 57 ntBASIC3.5□□□□□ -1.85
P20040 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.5□□□□□ -1.85
P20040 Gm3010-201ENSMUST00000198805 448 ntBASIC3.5□□□□□ -1.85
P20040 Gm43651-201ENSMUST00000199796 439 ntBASIC3.5□□□□□ -1.85
P20040 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
P20040 Gm44521-201ENSMUST00000206469 217 ntBASIC3.5□□□□□ -1.85
P20040 Gm44857-201ENSMUST00000208331 196 ntBASIC3.5□□□□□ -1.85
P20040 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
P20040 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
P20040 Gm18039-201ENSMUST00000217816 728 ntBASIC3.5□□□□□ -1.85
P20040 AL645546.2-201ENSMUST00000224526 265 ntBASIC3.5□□□□□ -1.85
P20040 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.5□□□□□ -1.85
P20040 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
P20040 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
P20040 Mir346-201ENSMUST00000083547 98 ntBASIC3.5□□□□□ -1.85
P20040 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
P20040 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
P20040 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
P20040 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
P20040 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
P20040 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
P20040 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
P20040 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
P20040 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
P20040 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
P20040 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
P20040 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
P20040 Gm22269-201ENSMUST00000104002 130 ntBASIC3.49□□□□□ -1.85
P20040 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
P20040 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
P20040 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
P20040 Gm8244-201ENSMUST00000121254 264 ntBASIC3.49□□□□□ -1.85
P20040 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
P20040 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.49□□□□□ -1.85
P20040 Gm23591-201ENSMUST00000157663 286 ntBASIC3.49□□□□□ -1.85
P20040 Gm24734-201ENSMUST00000158860 262 ntBASIC3.49□□□□□ -1.85
P20040 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
P20040 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.49□□□□□ -1.85
P20040 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
P20040 Mir5098-201ENSMUST00000175320 82 ntBASIC3.49□□□□□ -1.85
P20040 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Gm2092-201ENSMUST00000178887 639 ntBASIC3.49□□□□□ -1.85
P20040 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
P20040 Gm2759-201ENSMUST00000179938 639 ntBASIC3.49□□□□□ -1.85
P20040 Gm28471-201ENSMUST00000185994 615 ntBASIC3.49□□□□□ -1.85
P20040 Gm28598-201ENSMUST00000186490 615 ntBASIC3.49□□□□□ -1.85
P20040 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.49□□□□□ -1.85
P20040 Gm29268-201ENSMUST00000188669 615 ntBASIC3.49□□□□□ -1.85
P20040 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.49□□□□□ -1.85
P20040 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
P20040 Gm29218-205ENSMUST00000190846 615 ntBASIC3.49□□□□□ -1.85
P20040 Gm28978-201ENSMUST00000191120 615 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms